Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0505 ATGATCCATTTCTCACTCCAAAACCTACTTCTCTTCACTATGGGCCTCCTCGACCACTTGTGGGATGACACCGTCGCTGGCCCTCCGCCGGAGAACGGCCTCGGCAAGCTCCGAAGGCAACACACCTTCGCTTTCCGACCTGCCTCCGCCAACGAAACAGAGGGAGGGAGCATGAGATCGAACGGTGAGGATACGACGAAGGATGCGGTGAGAGTGACACGTAGTATCATGATCTTGAAACCTCCTGGACACTTGCACAGTCCTACTGGATCTGCTCCGGCATCACCTGCCGGATCTACTCCTCCGGTGTCTCCATTTTCCGCAGTCTCGGATAGAGTACAAAACATCGAAGAGAAACTCGTTCAAATCCCGAAGAAGCTGCCATGGGTATCGATCTTAAAGCCGGAGGTAAAAGCAAAAAGACCAAAAGAACCGCACCAAAGTCCAATGATATCTACCTTAAGCTCTTGGTTAAGGTTCCTTTACCGCTTCCTTGTCCGGAGAACTGGCAGCAAGTTCAATGCTGTCATACTTAAGCGCTTGTTCATGAGCAAAGTTAACAAGCCTCCACTTTCATTGTCCAGGTTGATTAAGTATACCAAGGGCAAGGAAGGTAAGATTGCTGTGGTGGTTGGGACTATAACTGATGATATCCGTTCATATGAAGTTCCACCCTTGAAAATTACAGCACTCAGGTTTACCGAGACTGCTCGTGCAAGAATAGAAAAGGCGGGTGGTGAATGCTTGACATTTGATCAACTGGCTCTTAGGGCCCCTCTTGGACAGAACACAGTCCTTCTTAGAGGCCCGAAGAATGCACGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCACACCAAGCCTTATGTGCGAGCTAAGGGAAGGAAGTTTGAGAAGGCTAGAGGAAAGAGAAACAGCAGAGGATTTAGGGTTTGA 951 0.4963 MIHFSLQNLLLFTMGLLDHLWDDTVAGPPPENGLGKLRRQHTFAFRPASANETEGGSMRSNGEDTTKDAVRVTRSIMILKPPGHLHSPTGSAPASPAGSTPPVSPFSAVSDRVQNIEEKLVQIPKKLPWVSILKPEVKAKRPKEPHQSPMISTLSSWLRFLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEGKIAVVVGTITDDIRSYEVPPLKITALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0505 316 Pfam Dormancy/auxin associated protein 20 101 IPR008406 -
Lal24g0505 316 PANTHER 60S RIBOSOMAL PROTEIN L18 158 315 IPR000039 GO:0003735|GO:0005840|GO:0006412
Lal24g0505 316 MobiDBLite consensus disorder prediction 81 106 - -
Lal24g0505 316 MobiDBLite consensus disorder prediction 92 106 - -
Lal24g0505 316 SUPERFAMILY Ribosomal proteins L15p and L18e 160 268 IPR036227 -
Lal24g0505 316 Gene3D - 132 316 - -
Lal24g0505 316 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 158 315 - -
Lal24g0505 316 MobiDBLite consensus disorder prediction 45 67 - -
Lal24g0505 316 Pfam Ribosomal protein 60S L18 and 50S L18e 146 316 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0505 Lal-Chr24 3558830 3564733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0505 157 316 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 75.000 1.79e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0505 K02883 - gmx:100791657 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0156 5 1358803 1360819 Lal24g0505 24 3558830 3564733 PCT