Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0504 ATGACCGGAGGAAATGAAGGGAAGAAGAATAGGATAGCAATTATAAGCGTCTCCGCCTTCTTACTGGTGGCTATGGTTGTGGCCGTGACGGTCGGTTTCAACTACAGTAAGGATGGTTTTGAGGATGATGGTTTAGAGGATAACCAGAAACATCATATAACTTCAACAGTAAAAGCAGTGAAAACCCTTTGTGCTCCTACTGATTACAAGCAAGAATGTGAAGAAAGTCTCATACCAGCAGCTGGCAACACCACAGATCCAAAAGAACTTGTTAAAATTGCCTTCAACATAACTATTGCCAAAATCAGTGATAAATTCAAGGAAGCTAATATCTTGCATGATCTTGAGAAGGAGCCAAGATCCAAGTCAGCACTTGAAACATGTAAACAACTCATGGATCTTTCCATTAGGGAGTTTGTAAGGTCACTTGAGACTATAAGTGACTTTAACCTCACTAATCTTGATGAAATTCTCAGCAATTTAAAGGTTTGGCTCAGTGGTGCAGTCACATACCAAGATACTTGCTTAGATGGATTTGAAAACACCACAAGCGAAGCTAGTAAGAAAATGAAGGACTTATTAACTTCAAGCATGCACATGAGTAGCAATGCCCTTGCCATTATAACTGAAATGGCTGACACAGTTGCAGATTGGAATGTTACAAGATTACTAGGTGGTCGTCGCCTCCTTGAGGAATCTAAGAGTGAAAATAGTTTCAATCTTCCAACTTGGGTTGATGATGCTCCTGGTGTACACAAACTTCTTGCAGAAGTTCCATTCAAAATCAAGCCTAATGTGACTGTAGCATTGGATGGCACTGGTGATTTCAAGAGCATCAATAAGGCATTGAAAAAGGTTCCTAATGAGAATGAAAAGCCATTCGTGATCTACATCAAGAAAGGTATCTACCATGAGTATGTTCATGTTACCAAGGATATGACCAATGTGGTGTTTGTTGGTGATGGTGGTGATAAGACAAGAATCACTGGCAACAAAAACTTCATAGATGGGGTTAACACCTACAACACAACCACTGTTGCTATTCAAGGAGATCACTTTATTGCCATTAATGTGGGGTTTGAGAACTCAGCTGGACCCCACAAGCATCAAGCAGTGGCCATTAGGGTCCAAGCAGACAAGTCCATCTTCTACAAATGCCAATTTGATGGTTACCAAGACACTCTTTATGCCCACACCCACCGTCAGTTCTATAGAGATTGCATCGTTTCAGGTACCATTGACTTCATCTTTGGTGATGCTATTGCTGTATTCCAGAACTGCACATTTGTTGTGAGAAAGCCAATGAAAAACCAGAATTGCATTGTTACCGCACAAGGCAGAAAGGACAGACACCAACCTACAGGAATAGTCATTCAAGGAGGTTCCATTGTAGCTGACCCTATGCTCCAGGCTGCCAAGTTGGACCATAAATCCTACCTTGCACGTCCATGGAAGAATTTCTCAAGAACCATCTTCATGGATACATTCATTGATGGTTTCATTGACCCAGAAGGTTATTTGGCATGGCAAGGAGAAGAGGGTCCTATGCATATGAACACTTGTTTCTATTCTGAGTATCACAACTATGGTCCTGGTTCTGATAAATCAAAGCGTGCACATTGGGCTGGAATCTGGAACCTGAATTCAAAGGCAGCACATTTGTTCCAACCATCAAAATTCTTTCATGGAGATGATTGGATTGAGGATACTGGTATTCCTTACTTCTCTAGCATTCCCAAACATTACAGGCACAAAAAGACAGTACTGAATTGGTTACCTGAAAAAGAAGACAAAGAAGAAAAGGAAGAGAAAAAAGACAAAGAAGAGAAGGAAGACAAAAAGGATAAAGAAGAAAACGATGACAAAAAACACAAGGAAGAAAAATCTAGCCGTCGTTAA 1899 0.4065 MTGGNEGKKNRIAIISVSAFLLVAMVVAVTVGFNYSKDGFEDDGLEDNQKHHITSTVKAVKTLCAPTDYKQECEESLIPAAGNTTDPKELVKIAFNITIAKISDKFKEANILHDLEKEPRSKSALETCKQLMDLSIREFVRSLETISDFNLTNLDEILSNLKVWLSGAVTYQDTCLDGFENTTSEASKKMKDLLTSSMHMSSNALAIITEMADTVADWNVTRLLGGRRLLEESKSENSFNLPTWVDDAPGVHKLLAEVPFKIKPNVTVALDGTGDFKSINKALKKVPNENEKPFVIYIKKGIYHEYVHVTKDMTNVVFVGDGGDKTRITGNKNFIDGVNTYNTTTVAIQGDHFIAINVGFENSAGPHKHQAVAIRVQADKSIFYKCQFDGYQDTLYAHTHRQFYRDCIVSGTIDFIFGDAIAVFQNCTFVVRKPMKNQNCIVTAQGRKDRHQPTGIVIQGGSIVADPMLQAAKLDHKSYLARPWKNFSRTIFMDTFIDGFIDPEGYLAWQGEEGPMHMNTCFYSEYHNYGPGSDKSKRAHWAGIWNLNSKAAHLFQPSKFFHGDDWIEDTGIPYFSSIPKHYRHKKTVLNWLPEKEDKEEKEEKKDKEEKEDKKDKEENDDKKHKEEKSSRR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0504 632 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 211 IPR035513 -
Lal24g0504 632 Pfam Pectinesterase 265 564 IPR000070 GO:0030599|GO:0042545
Lal24g0504 632 MobiDBLite consensus disorder prediction 593 632 - -
Lal24g0504 632 CDD PMEI-like_3 62 212 - -
Lal24g0504 632 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 212 IPR035513 -
Lal24g0504 632 Gene3D - 259 578 IPR012334 -
Lal24g0504 632 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Lal24g0504 632 PANTHER PECTINESTERASE 10 579 - -
Lal24g0504 632 Coils Coil 596 627 - -
Lal24g0504 632 SMART PMEI_2 55 207 IPR006501 GO:0004857
Lal24g0504 632 PANTHER PECTINESTERASE 10 579 - -
Lal24g0504 632 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Lal24g0504 632 SUPERFAMILY Pectin lyase-like 263 575 IPR011050 -
Lal24g0504 632 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0504 Lal-Chr24 3555078 3557107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0504 8 578 Carbohydrate Esterase AT3G05610 48.776 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0504 K01051 - gmx:100776244 885.174