Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0487 ATGGTTTACGAGGAAGAGTTGTTGACTGAGAAAGTATGCAAGCTATATGATCAAATCTCAAACCTAGAGAGTCTGAAACCCTGCAAAAATGTTGACACCCTTTTCACCCAACTTGTTCATACATGCATGCCACCTAGCCCTATTGATGTTACTAAACTCAGCACAAATGTTCAAGAGATTAGAACAAAACTTATAAGGCTATGTGGTGAAGCTGAAGGCCTTTTGGAGAGTCACTACTCAACCATCTTAGGTAATAATTCATATGAGAATCCACTCCATTATCTCAATATTTTTCCTTACTATTCCAATTACCTCAAACTTGCTCTCCTTGAATTCACTATCCTTAACCAACACTGCACCAAAAACCCTAGCAAAATTGCTTTTGTGGGGTCAGGTCCACTTCCCCTTACTTCAATTGTGTTGGCCTCAAATCACTTACCAACCACCACTTTTCACAACTATGACATTGACCCTTTGGCCAATTCCAAAGCCTTGAGATTGGTCTCTTCTGACCATGACTTATCAAAGCGCATGGTTTTTCACACCAATAATATATTGGATGTGACAAATGATTTGGAAGACTACGAAGTTGTTTACTTAGCGGCACTCGTTGGAATGGACACTGGGGAAAAGAAAAGAATCATTGATCACTTGGCCAAGTACATGGCCAAGGGAGCACTTTTGATGGTTAGAAGTGCCCATGGTGCACGGGCTTTTCTCTATCCAGTAGTTAATCCTTGTGATCTTATAGGGTTTGAAGTCCTCTCTGTGTTTCATCCGACCGATGAGGTTATTAATTCTGTTGTTATAGCACAAAAGTGCCTTATGCCTACACATTCACTTGAGAATGGCCTTGGTTCTATGCTACAAAGTAACTGTTCTAATGAGACAAAAGTCTCTAACCCCCTCATTAATGGGAATGTAACTGAAGAATTGGTCACCAAGGAGGAGCTATCCTAA 960 0.4052 MVYEEELLTEKVCKLYDQISNLESLKPCKNVDTLFTQLVHTCMPPSPIDVTKLSTNVQEIRTKLIRLCGEAEGLLESHYSTILGNNSYENPLHYLNIFPYYSNYLKLALLEFTILNQHCTKNPSKIAFVGSGPLPLTSIVLASNHLPTTTFHNYDIDPLANSKALRLVSSDHDLSKRMVFHTNNILDVTNDLEDYEVVYLAALVGMDTGEKKRIIDHLAKYMAKGALLMVRSAHGARAFLYPVVNPCDLIGFEVLSVFHPTDEVINSVVIAQKCLMPTHSLENGLGSMLQSNCSNETKVSNPLINGNVTEELVTKEELS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0487 319 PANTHER SYNTHASE, PUTATIVE-RELATED 3 318 - -
Lal24g0487 319 Pfam Nicotianamine synthase protein 5 275 IPR004298 GO:0030410|GO:0030418
Lal24g0487 319 Gene3D Vaccinia Virus protein VP39 6 275 IPR029063 -
Lal24g0487 319 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Lal24g0487 319 PANTHER NICOTIANAMINE SYNTHASE 3 3 318 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0487 Lal-Chr24 3430329 3431288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0487 4 273 Nicotianamine Synthase Gene Family AT1G56430 64.103 9.39e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0487 K05953 - gmx:100794250 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0487 24 3430329 3431288 Lal24g0487 24 3430329 3431288 ECH