Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0486 ATGGAAGATATTTTCAAGATGAACCCTCCTCTTTTATCATCTTCATGTTCAGATAATGTTGTTAGAGTTGGCAACACTGCTTTTATTACTTCTGAATATCTTCAACTAGAAGTGCCCGAACCGGATAGAACCGGTTCAGGTAACTCGGATCGGCTTATCAAAAACCAGATCGCCAATCATCCTCTTTTTCCAGATTTAGTGTCTGCATACATACAATGCCAAAAGGTTGGAGCACCACCAGAAGTGGCGTCTATGTTTGAAGAAATAGGCCGTGAAAGTCACTCCACCGGTGCTCGCGGTGAGATCGGAGATGATCCCGAGCTCGACGATTTCATGGGATCATACTGCGAAGTTGTTCGTAAATTGAAGGAGGATTTGTCTAAGCCCTTCAACGAAGCAACGTTGTTTTTGTGCAATATGGAATCACAATTCAACAACCTCTGTAATGTAACACTAAAATTGCCATCGGATATCAACAACAACCGCTCCGGTAACGACCTCTTAAATTGTGTTATCTTCCTTGTATCATAG 531 0.4218 MEDIFKMNPPLLSSSCSDNVVRVGNTAFITSEYLQLEVPEPDRTGSGNSDRLIKNQIANHPLFPDLVSAYIQCQKVGAPPEVASMFEEIGRESHSTGARGEIGDDPELDDFMGSYCEVVRKLKEDLSKPFNEATLFLCNMESQFNNLCNVTLKLPSDINNNRSGNDLLNCVIFLVS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0486 176 Pfam KNOX2 domain 102 148 IPR005541 GO:0003677|GO:0005634
Lal24g0486 176 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 10 29 161 - -
Lal24g0486 176 SMART KNOX2_2 98 149 IPR005541 GO:0003677|GO:0005634
Lal24g0486 176 Pfam KNOX1 domain 53 94 IPR005540 GO:0003677|GO:0005634
Lal24g0486 176 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 29 161 - -
Lal24g0486 176 SMART KNOX1_2 51 95 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0486 Lal-Chr24 3423575 3429336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0486 17 149 Homeobox Transcription Factor Family AT1G23380 45.324 2.00e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0486 - - var:108324363 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0486 24 3423575 3429336 Lal24g0486 24 3423575 3429336 ECH