Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0483 ATGGAGCTGCTACTTTTTCGAGCAATGATTCTCCCTATTTTTTTGTTACTTATCTCTTCTTCCCCAGTTTATATAGTTGCACAAGATTGTGGCAACAAAATTACAAAAACCATTGTTGTCGATAAATCGGGGAAAGCAGGAGGATTCACAAAAATTCAAGAAGCAATTGATTCAATAGATGGAAACAACAAAAAATGGGTTAAAGTTCAAATACATGCTGCCACTTACACTGAGAAAGTCCAAATTCCTTATAACAAGCCATGCATCTATTTAGAAGGTGAAGACAGAGAATCCACCATTATTACATACAATGACCATCAACAAACAGATACCAGCGCCACTTTCTCTTCCTTCCCAGACAATATTATTGCACGGGGTATTACTTTTAAGAACTCATACAATTTGGAAAACCAAGATAGAAAAGTTGTCCCAGCAGTTGCAGCAAGAATATATGGAGACAAATGTGTCTTTTTTGATTGTGGCTTCATTGGTTATCAAGATACATTGTGGGATGTAGAAGGTCGTCATTACTTCAAAGATTGCACTATAGAAGGAGCTATAGACTTCATATTTGGTTATGGTCAATCATATTTCGAGAATTGCAATCTCAATGCGATATCCTCAGGTTATGTAACTGCTCATGGACGACATGCGAAAAATGATAGAGGTGGTTTTGTATTCAAAGGTGGTAAATTGAGTGGTAATGGACAAACATTATTAGGAAGAGTTTATGGACCATTTTCTAGAGTTCTATTTTATGGAACATATTTGAGTTCTGTAGTTGCACCTGCAGGATGGAGTGGTTGGCATTCAAATATAGGTTATAAGGCGAATTTCATTGAAGCTGAATGTAAAGGGCCAGGTGCTGATACTTCAAGGCGCGTACCTTGGTCGAAGAAGCTGGATAGCTCACAATTAGGCAAATATACGAGAAAAGTCTTCATGGACCGAGATGGTTGGCTTTCATATTTACCAATTGATGTGTAA 987 0.3739 MELLLFRAMILPIFLLLISSSPVYIVAQDCGNKITKTIVVDKSGKAGGFTKIQEAIDSIDGNNKKWVKVQIHAATYTEKVQIPYNKPCIYLEGEDRESTIITYNDHQQTDTSATFSSFPDNIIARGITFKNSYNLENQDRKVVPAVAARIYGDKCVFFDCGFIGYQDTLWDVEGRHYFKDCTIEGAIDFIFGYGQSYFENCNLNAISSGYVTAHGRHAKNDRGGFVFKGGKLSGNGQTLLGRVYGPFSRVLFYGTYLSSVVAPAGWSGWHSNIGYKANFIEAECKGPGADTSRRVPWSKKLDSSQLGKYTRKVFMDRDGWLSYLPIDV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0483 328 ProSitePatterns Pectinesterase signature 2. 183 192 IPR033131 -
Lal24g0483 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 326 - -
Lal24g0483 328 Pfam Pectinesterase 38 316 IPR000070 GO:0030599|GO:0042545
Lal24g0483 328 PANTHER PECTINESTERASE 7 326 - -
Lal24g0483 328 SUPERFAMILY Pectin lyase-like 35 327 IPR011050 -
Lal24g0483 328 Gene3D - 31 327 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0483 Lal-Chr24 3392523 3394973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0483 32 271 Carbohydrate Esterase AT2G19150 47.177 8.42e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0483 - - lang:109353850 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0483 24 3392523 3394973 Lal24g0483 24 3392523 3394973 ECH