Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0482 ATGGCTTCTGAACAAAATATAGATGATTCCACTAATTCAGACATTTCCAACCACAAGAAACGCAGAAAAATCACACACAACAACCAACCCTTCGATCTATATTCCCCTAACCTAATCGTATGGAGTTCTCAATCTCAGCAACAGATCTATTCTTCCAATCTTGTCCAAGCCCTCCGCCGCTCTCCTCCTTCCCCCGCCGCACGTCATGTCCGCGACACCGCCGACCGAATCCTCGCACGTGCTGCCAAGGGAAGAACACGCTGGAGCCGTGCGATTCTCGCTTCACCGCGATGGAAGCTGCAGAGGAATAAACTCAAGAAAGTGAAGAAGGCTTCGAATGGATTGAAGAAAACGGGAATTACCGGAGGTGACCGGAAGAGAAAGAGGAGGTTACCGGCTGTGGAGAAGAAAGCGCGAGTTCTGAGCCGGTTGGTTCCAGGTTGCAAGAAAGTGTCGTTCCAGAATCTTCTGGAAGAAGTGAGTGATTATATTTCGGCGTTGGAGATGCAAGTAAGAGCCATGACGGCTCTAACTCAGTTACTCGACGGCGGAATGCCTTCCGTTGTTTGA 570 0.4965 MASEQNIDDSTNSDISNHKKRRKITHNNQPFDLYSPNLIVWSSQSQQQIYSSNLVQALRRSPPSPAARHVRDTADRILARAAKGRTRWSRAILASPRWKLQRNKLKKVKKASNGLKKTGITGGDRKRKRRLPAVEKKARVLSRLVPGCKKVSFQNLLEEVSDYISALEMQVRAMTALTQLLDGGMPSVV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0482 189 MobiDBLite consensus disorder prediction 104 131 - -
Lal24g0482 189 PANTHER TRANSCRIPTION FACTOR BHLH150 13 187 - -
Lal24g0482 189 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 187 IPR044660 GO:0006355
Lal24g0482 189 CDD bHLH_AtIBH1_like 125 178 IPR044549 GO:0006355
Lal24g0482 189 MobiDBLite consensus disorder prediction 1 29 - -
Lal24g0482 189 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 181 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0482 Lal-Chr24 3379674 3381344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0482 41 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 49.324 1.19e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0482 - - aprc:113873135 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0482 24 3379674 3381344 Lal24g0482 24 3379674 3381344 ECH
Lal13g0607 13 3946203 3946763 Lal24g0482 24 3379674 3381344 LSH
Lal5g0176 5 1535244 1535798 Lal24g0482 24 3379674 3381344 PCT
Lal24g0482 24 3379674 3381344 Lal5g0176 5 1535244 1535798 PCT