Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0478 ATGTCGCCGGAGAAGGAAGAAAGAGACGAATATGGAGTTCTTCTCTATTACAATTACGCTGAGATCCCTGACCTGAATGACATGGTCACATTCTACAACTCCAATTGCTCCTCCCTCGGTCTTCTCGGTCGTGTTCGCATTTCTCCCAACGGCGTCAATGTCACTGTTGGAGGCAAGTTATCATGTTTGAAGAGCCACATTGATGCCGTTAAATCAATTCATAATGGATTGTTTCAATCCACTGATTTCAAGCTTGCAACATGTCACCACCCTTTGAATGATCAAGTTGCTCAAGAATCTGGTTTCACGTCTCTATCTATTCGAATCGTTAAGGAACTGGTTACTCTCAGTTCTCACCCACTGTTAAAGTCACCTGAAATTTCGAATGCCGGAAGGCATCTGTCTGCAGTGGAGTTCCATTCTTCCCTTCACAAAGCTGATAAGGAGAGTCCGGAAAATAGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTTGATGTACCAAATGTTGAAACTTTGGATCCCCAAGTTAGGCAGTATAGTGATTTGTCCTCATGGATAGATGATAAGAGTGACCAGTTGAAAGGGAAACATATCCTCATGTATTGTACTGGTGGAATAAGGTGTGAAATGGCATCAGCATATATCAAGTCAAAGGGTGCTGGGTTTGAGAATGTGTTTCAGTTATATGGTGGTATACAACGGTATTTGGAGCAATTCCCAGACGGTGGCTTTTTCAAAGGAAAGAATTTTGTATTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATATTATTGGTACCTGCCTTATTTGTCACTGTTCATTTGATGATTATTCTTCACGCTGCCGCTGTACTTATTGCAGAATGCTTGTGTTGGTCTGTAATAGTTGCCAGAATGAAGCTGCATTGTATGTTTGTGAGCTATGCCAAAAACAGGGCAAGGCTGTTAGATCAATGCAATTAATTGAGAATGGTGAATCAAAAACATCACTGCCAGGTGTTGATTTCCAAGATTTTTCTTCAGATACTATATTATTGCCTCAAATGCCTAGGGGAGATGATGTTAAGACCTCAAGAAAACTGAGAATCTTATGCTTGCATGGGTTTCGGCAGAATGCGTCCAGTTTTAAAGGAAGAACAGCATCATTAGCCAAAAAACTCAAGAAAATTGCTGAATTTGTTTTCATAGATGCGCCTCATGAGTTGCCATTCATTTATCAAACCCCCACGCCGATTCTCCAGGGCAGTTGTGTATTGTCTTCATCTCCTCCAAGTCCTCCTCCACCTTCAGAGAATTGCAGGAAGAAGTTTGCGTGGTTTTTGGCACCCAATTTTGATGGAGGTTGTGGTGTTGATTGGAAGGTAACAGATAGTCCGTTTGATCCACTTCAATACCAACACCAAACTGATGGATATGCTATTTCACTATCACATTTGGAGACTGTGTTTTCCCAACAAGGGCCATTTGATGGAATCTTAGGCTTTTCGCAGGGCGCAGCAATGACCGCTTTAATATCTGCACAACAAGAAAAGCTGAAAGGTAAAATGGACTTTAACTTTGTAATCTTGTGCTCAGGCTTTGCTCTCAATGTGAAGGAGATGGAATGTAGCTTTATCAAGTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAGGACAGGCAGATAGATAACCAAGCAAGCAAGGAACTCGCTTCTCGATATGATGGAGGTTGTTCGGTGATCATCGAACATGATTGTGGTCATATAATTCCTACTCGTTCCCCGTATATTGATGAGATCAAGGATTTCCTTGGCCGTTTTCTGTAA 1836 0.4129 MSPEKEERDEYGVLLYYNYAEIPDLNDMVTFYNSNCSSLGLLGRVRISPNGVNVTVGGKLSCLKSHIDAVKSIHNGLFQSTDFKLATCHHPLNDQVAQESGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSAVEFHSSLHKADKESPENSLVLLDARNLYETRIGKFDVPNVETLDPQVRQYSDLSSWIDDKSDQLKGKHILMYCTGGIRCEMASAYIKSKGAGFENVFQLYGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIIGTCLICHCSFDDYSSRCRCTYCRMLVLVCNSCQNEAALYVCELCQKQGKAVRSMQLIENGESKTSLPGVDFQDFSSDTILLPQMPRGDDVKTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKIAEFVFIDAPHELPFIYQTPTPILQGSCVLSSSPPSPPPPSENCRKKFAWFLAPNFDGGCGVDWKVTDSPFDPLQYQHQTDGYAISLSHLETVFSQQGPFDGILGFSQGAAMTALISAQQEKLKGKMDFNFVILCSGFALNVKEMECSFIKCPSLHIFGNEHGKDRQIDNQASKELASRYDGGCSVIIEHDCGHIIPTRSPYIDEIKDFLGRFL 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0478 611 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 610 IPR020936 -
Lal24g0478 611 Pfam Rhodanase C-terminal 253 318 IPR022111 -
Lal24g0478 611 Gene3D alpha/beta hydrolase 364 611 IPR029058 -
Lal24g0478 611 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 120 265 IPR036873 -
Lal24g0478 611 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 610 - -
Lal24g0478 611 SMART rhod_4 141 248 IPR001763 -
Lal24g0478 611 ProSiteProfiles Rhodanese domain profile. 151 251 IPR001763 -
Lal24g0478 611 Pfam UPF0176 acylphosphatase like domain 12 112 IPR040503 -
Lal24g0478 611 Gene3D - 123 277 IPR036873 -
Lal24g0478 611 Pfam Serine hydrolase (FSH1) 367 602 IPR005645 -
Lal24g0478 611 SUPERFAMILY alpha/beta-Hydrolases 371 611 IPR029058 -
Lal24g0478 611 Gene3D - 2 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0478 Lal-Chr24 3359207 3364057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0478 6 611 Sulfurtransferasese or Rhodanese AT1G09280 63.279 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0478 - - gmx:100786152 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0478 24 3359207 3364057 Lal24g0478 24 3359207 3364057 ECH