Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0476 ATGGCGCCAAAATCCAAATCCGCCAAAACTTCCGCCGCTTCATCTCCTTCCACAACCCCCTTCAAGGCGGGCTTCGCTGTCGAGGTCAGCTCCGACGACCAAGGTTTCCGCGGTTCATGGTTCACCGGCAAGGTCATCCGCCGCGTCGCCAATAACCGCTTCTTGATCGAGTACGACAACCTCATGGAGGATGAGAGCGGTTCGAAGCGGTTGAGAGAGGTTCTTAACCTCCACCAGCTACGGCCGATTCCTCCGACGGAGACCGGTCGGGAATTCAAGTTCGGCGACGAGGTCGACGCGTTCCATAACGACGGGTGGTGGGAGGGTCACATCACCGAAGAGTGTGGGGATGGAAGGTTCGCTGTGTATTTCAGAGTTTCGAGGGAGCAGATCGTGTTCCAGAAAGAAGAACTCAGACTCCACCGTGAGTGGTTCCATGAGAATTGGGTTCCGCCATTCGAACAACAACAGCAGCAGCAAGAACAAGAGAAAGTGTTGACACCAGCTGTGAAGTCTGCTGAGACTGTGACACCAACTGTGAAGTCTGCTGAAACTGTGACACCAGCTGTGAAGTCTGCTCAAACTGTGACACCAGCTGTGAAGTCTGTTAAAATTGTGACAGATGAGAGATTTAGTGTAGGGACACCAGTTGAGGTTAGCAGTGATGAAGAAGGTTTCCAAGGAGCTTGGTTTTCTGCTACTGTTGTTCAAGTCATAGGAAAGGGAAAGTTCCTTGTTGAGTACCAGAGCCTACTGGCTGATGATGGTTCCCAGCTTTTGAGAGAGGAGGTTGATACCCACCACATAAGGCCTCATCCGCCACAAACTGTTGATCGTCACTTTAGTGTTCTTGAAGAAGTTGATGCTTTTCACAATGATGGCTGGTGGGTTGGCATGGTTTCTAAATTTCTTGACAACTCAAGGTATGTAGTTTACTTCAGGAACAGCAATGAAGAACTAGAGTTTCAGCACTCCCAGTTGAGGAAACACCAGGACTGGATTGATGGCAAATGGACCGTGGCTTCGAAGGTGTTGGATTTGTGA 1044 0.5019 MAPKSKSAKTSAASSPSTTPFKAGFAVEVSSDDQGFRGSWFTGKVIRRVANNRFLIEYDNLMEDESGSKRLREVLNLHQLRPIPPTETGREFKFGDEVDAFHNDGWWEGHITEECGDGRFAVYFRVSREQIVFQKEELRLHREWFHENWVPPFEQQQQQQEQEKVLTPAVKSAETVTPTVKSAETVTPAVKSAQTVTPAVKSVKIVTDERFSVGTPVEVSSDEEGFQGAWFSATVVQVIGKGKFLVEYQSLLADDGSQLLREEVDTHHIRPHPPQTVDRHFSVLEEVDAFHNDGWWVGMVSKFLDNSRYVVYFRNSNEELEFQHSQLRKHQDWIDGKWTVASKVLDL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0476 347 Gene3D - 203 281 - -
Lal24g0476 347 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 188 344 - -
Lal24g0476 347 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 17 161 - -
Lal24g0476 347 MobiDBLite consensus disorder prediction 1 20 - -
Lal24g0476 347 Pfam Agenet domain 214 274 IPR008395 -
Lal24g0476 347 Pfam Agenet domain 26 85 IPR008395 -
Lal24g0476 347 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 17 161 - -
Lal24g0476 347 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 188 344 - -
Lal24g0476 347 SMART agenet_At_2 279 335 IPR014002 -
Lal24g0476 347 SMART agenet_At_2 19 88 IPR014002 -
Lal24g0476 347 SMART agenet_At_2 90 146 IPR014002 -
Lal24g0476 347 SMART agenet_At_2 209 277 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0476 Lal-Chr24 3353255 3356662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0476 221 333 PHD Transcription Factor Family AT5G58610 29.851 3.18e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0476 - - lang:109346228 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0476 24 3353255 3356662 Lal24g0476 24 3353255 3356662 ECH
Lal12g0570 12 4074433 4077013 Lal24g0476 24 3353255 3356662 LSH
Lal13g0603 13 3922223 3928265 Lal24g0476 24 3353255 3356662 LSH