Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0464 ATGGTTCGTGAAGGTACAGCTACATGCATAGACATTCTCCTTGCCATCATTCTTCCTCCTCTTGGTGTTTTCCTCAAATATGGCTGCAAGGTTGAGTTTTGGATCAGTTTGTTGCTAACCATTTGTGGATATCTCCCTGGAATTATTTATGCTGTTTATGCTATTACCAAGTGGACAATGAAGTCAAGGGTTCTGATTAATAAGAATGCTATTGACATTATTGGGCAATCATCCCCAGGAAGTTTACAGTCCGGACAGCATCCATCAAAGGCCATCCTACAAATCCCACATGTTTCATCCTGGGCATCCCAAGTCCACGACGAAACAGCATGCCATCTATATTTGGCAAAAGGAATACGACGTTTAGGACATGATTGA 378 0.4206 MVREGTATCIDILLAIILPPLGVFLKYGCKVEFWISLLLTICGYLPGIIYAVYAITKWTMKSRVLINKNAIDIIGQSSPGSLQSGQHPSKAILQIPHVSSWASQVHDETACHLYLAKGIRRLGHD 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0464 125 PANTHER BNAC03G34420D PROTEIN 3 57 - -
Lal24g0464 125 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
Lal24g0464 125 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Lal24g0464 125 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 57 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0464 Lal-Chr24 3278851 3281564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0464 6 57 RCI2 Gene Family AT3G05890 76.923 1.14e-23 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0464 - - nnu:104607190 99.3673