Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0433 ATGGAAGGTACAGTGCTGAATTCTTCCTTCCCTTGTTATAATCCATTTAGTAACGTCTTTGATTTCTGTGAAGTGGAAAAGAGTTCTTTAGGGTTTATGGAATTACTGGGTGTTCAGGACTTTAGTGCTCACTTTGTTGATTTACCGCAACAACAACAACTATCAACTATGTATGTGCCTAAGGTGGTTCAAACTGACACTACAGTGAAAGAGTGTAACACTGAGGTATTGAACCACGAACCTGCTACTCCAAACTCCTCTTCCATTTCATCTGCGTCCACCATTGAAGCAGTTAATGATGAACACATTAAAACTGTAGACCAAGCTGAGGAAGAAGAACAGAAGAAGACCAAGAAACTTTTGAAGGCGAAGAAGACTAATCAGAAGAGGAAAAAAGAACCAAGAGTGGCGTTCATGACAAAAAGCGAGGTGGATCATCTAGAAGATGGTTATAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTCCCCAGAAGTTATTATCGTTGCACAAGTGCTTCATGTATTGTGAAGAAACGCGTAGAGCGTTTTTTTACTGATCCAACCGTTGTTGTCACTACCTATGAAGGTCAACACACACATCCAAGTCCGGTTATTCCTCGTTCGGGCCTTGCCGGTGCTCCGATAACACAAGGTGTCTCCGCCACTGGCTACTTATCTCAGTATCAGCAGCAAAACTTTAAGCAACAACAACTTCTTTTCAATACATTGTCGTCTTTGAGTTTCCCTTACATCCATTCTACACCTTCGAAGGTTGCTTTTGCTCAAGAGAGATTGGTTTGTAATCAAGGGACAAATGCTACATTTATAAGGGACCATGGGCTGCTTCAGGACGTTGTTCCTTCACATATGTTAAAAGAAGAGTAG 897 0.4158 MEGTVLNSSFPCYNPFSNVFDFCEVEKSSLGFMELLGVQDFSAHFVDLPQQQQLSTMYVPKVVQTDTTVKECNTEVLNHEPATPNSSSISSASTIEAVNDEHIKTVDQAEEEEQKKTKKLLKAKKTNQKRKKEPRVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCIVKKRVERFFTDPTVVVTTYEGQHTHPSPVIPRSGLAGAPITQGVSATGYLSQYQQQNFKQQQLLFNTLSSLSFPYIHSTPSKVAFAQERLVCNQGTNATFIRDHGLLQDVVPSHMLKEE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0433 298 PIRSF WRKY_txn_fact_IIc 3 298 IPR017396 GO:0003700
Lal24g0433 298 SMART WRKY_cls 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0433 298 MobiDBLite consensus disorder prediction 108 134 - -
Lal24g0433 298 Pfam WRKY DNA -binding domain 148 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0433 298 Gene3D WRKY domain 131 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal24g0433 298 ProSiteProfiles WRKY domain profile. 142 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0433 298 PANTHER WRKY TRANSCRIPTION FACTOR 10 290 - -
Lal24g0433 298 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 290 IPR044810 GO:0003700
Lal24g0433 298 SUPERFAMILY WRKY DNA-binding domain 139 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal24g0433 298 Coils Coil 92 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0433 Lal-Chr24 3079136 3080796 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0433 13 298 WRKY Transcription Factor Family AT2G47260 46.221 1.02e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal24g0433 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0433 - - lang:109353563 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0433 24 3079136 3080796 Lal24g0433 24 3079136 3080796 ECH
Lal12g0533 12 3812299 3814531 Lal24g0433 24 3079136 3080796 LSH
Lal13g0537 13 3486964 3490265 Lal24g0433 24 3079136 3080796 LSH