Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0429 ATGGACACTAACACCTCCTCTAAACCAGAAACTCATGCATCCAAAAAACGGAAAATGGTTCAGAAAACAGTGGTGAAGGTGAAGATAGGAGAAAATGTTAGCAAGGTGAAGAATGAAGGGCTACCTAATGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATTAAAGGGTCTCCTTATCCAAGGGGATATTATAGGTGCAGCACATGCAAGGGTTGTTCAGCCAAAAAACAAGTAGAGAGATGCAGAACAGATTCATCAATGCTCATAATAACCTATACCTCCTCACATAATCACCCTGTTTCTGATCATGTCCCATGCTCAATAAATTTAGTCCAACAACCAAAACAACCTGAAATCCAAACCATTGAATATGTTCCTAGTAGTCCTACCCCAAAGGAAGAAGACCAAGAAAAGAAACAAGAGAAGGAAAATCATAATGAGTCCACTATGACAAGTGATCACAATGGTACAAATGAAGAGAAGTTTCATTACTTGCAATCTCCAACACCTTGCAATGAAGAGATTATAGACCAAGATGGTATTTTCAAACTCAACAACCAAGAGAAAACCCACGAAGAAATGGACCCCCTCTTAGAGATAGAGCCTATGTGTTATTCACAAATCAAGAATTTGTCAGCACCTAAATTAGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGCTACCCATGTCTTCATCTTTCCAACACTATACAAATATCAGTTTTTCCAATGAACATATTCCCATTGTCCCTTCCTAG 765 0.3843 MDTNTSSKPETHASKKRKMVQKTVVKVKIGENVSKVKNEGLPNDFWSWRKYGQKPIKGSPYPRGYYRCSTCKGCSAKKQVERCRTDSSMLIITYTSSHNHPVSDHVPCSINLVQQPKQPEIQTIEYVPSSPTPKEEDQEKKQEKENHNESTMTSDHNGTNEEKFHYLQSPTPCNEEIIDQDGIFKLNNQEKTHEEMDPLLEIEPMCYSQIKNLSAPKLEELDFFDELEELPMSSSFQHYTNISFSNEHIPIVPS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0429 254 MobiDBLite consensus disorder prediction 132 160 - -
Lal24g0429 254 ProSiteProfiles WRKY domain profile. 37 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0429 254 MobiDBLite consensus disorder prediction 119 160 - -
Lal24g0429 254 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 6 238 IPR044810 GO:0003700
Lal24g0429 254 MobiDBLite consensus disorder prediction 1 21 - -
Lal24g0429 254 SMART WRKY_cls 42 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0429 254 SUPERFAMILY WRKY DNA-binding domain 38 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal24g0429 254 Pfam WRKY DNA -binding domain 43 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0429 254 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 6 238 - -
Lal24g0429 254 Gene3D WRKY domain 26 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0429 Lal-Chr24 3053896 3055655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0429 6 101 WRKY Transcription Factor Family AT2G34830 61.856 1.83e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal24g0429 WRKY 1.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0429 - - gmx:100127368 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0429 24 3053896 3055655 Lal24g0429 24 3053896 3055655 ECH