Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0426 ATGGCTTCGATTCAACGCTCAGCTGCGAGTTCGGGATCGGAAGGTGGAGATCCTGCTTTGATGGACGAGAGGAAGAGGAAGAGGATGATATCGAACCGCGAATCCGCGAGGCGATCGAGGATTAAGAAGCAGAAAGTTCTAGAAGATTTGACTGAAGAAATGTATCGATTGCAACACTCGAAGAAGGAGATAAGTCAGAGCATCAAAATGAAGGAGGATGCGTATTTGAAGATAGAATCTGCCAATAACATTCTCAGGGCTCAAACAATGGAGCTCTCGGATCGGTTACATTCTCTGAATTCCATCATTGAAATGGCTGAAGAGGTTAACATGAACGGTAGCTTTAACGTTTTCCCTATTGAGATGCCGCAGATTTCAGATCCTTTCATGAACCCGTGGCAGTTATATTATCCGTTTCATCCTCTCATGGCGTCTCCTGATATGTCCCTGCATTGA 456 0.4496 MASIQRSAASSGSEGGDPALMDERKRKRMISNRESARRSRIKKQKVLEDLTEEMYRLQHSKKEISQSIKMKEDAYLKIESANNILRAQTMELSDRLHSLNSIIEMAEEVNMNGSFNVFPIEMPQISDPFMNPWQLYYPFHPLMASPDMSLH 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0426 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 69 IPR004827 GO:0003700|GO:0006355
Lal24g0426 151 SUPERFAMILY Leucine zipper domain 24 75 IPR046347 GO:0003700|GO:0006355
Lal24g0426 151 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Lal24g0426 151 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 149 - -
Lal24g0426 151 Coils Coil 33 67 - -
Lal24g0426 151 MobiDBLite consensus disorder prediction 1 42 - -
Lal24g0426 151 Pfam bZIP transcription factor 24 81 IPR004827 GO:0003700|GO:0006355
Lal24g0426 151 MobiDBLite consensus disorder prediction 18 42 - -
Lal24g0426 151 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Lal24g0426 151 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 149 - -
Lal24g0426 151 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Lal24g0426 151 Gene3D - 22 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0426 Lal-Chr24 3028757 3029212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0426 1 148 bZIP Transcription Factor Family AT3G62420 45.033 2.94e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal24g0426 bZIP_1 6.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0426 K25786 - gmx:778130 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0426 24 3028757 3029212 Lal24g0426 24 3028757 3029212 ECH