Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0408 ATGTCCAATACCCATGCCCCTATTTCTAAGGGTCTCCTTTGCAATGCAGGTGCTGGTGCTGCCGCTGGAGTTATTGCTGCTACATTTGTTTGCCCCTTAGATGTAATCAAAACTAGGTTGCAGGTTCAGGGGACCCCTCAGCTCCCTAATGCAACTGTTAAAGGCAGTTTTATTGTTGGTAGTTTGGAACAAATAGTTCAACGGGAGGGTTTGCGTGGCATGTACCGGGGACTAGCCCCGACCGTGTTGGCTTTACTTCCAAACTGGGCGGTTTATTTTACTATATATGAGCAGATCAAGAGCCTGCTTTCTTCTAGAGATGAAAATTGCTGTCTTTCAGTTGGAGCTAATGTGGTAGCTGCTTCTGGGGCTGGAGTTGCAACTACCTTTGCTACAAATCCACTATGGGTTGTCAAGACTAGGCTCCAAACCCAGGGAATAAGACCTGGTGTTGTGCCATACAAGAGCACAATATCTGCTTTAAGAAGAATTTCTCGTGAGGAGGGCATTCGAGGGCTGTACAGTGGCCTCGTACCTGCTCTGGTTGGTGTCAGTCATGTCGCAATCCAGTTTCCCACATATGAGAAAATAAAATTTTATTTGGCAAAACAAGATGACAAGGCAATGGAAGAGCTTGGTGCATGTGAAGTTGCAATTGCCTCATCAATCTCCAAATTTTTTGCATCCACTTTGACATATCCTCATGAGATTATTCGTTCCAGACTTCAAGAACAAGGGCACCACTCAGAAAAGCGGTACTCTGGTGCGACCGACTGTGTTAGAAAGGTATTTCAACAAGAGGGAATCTCTGGTTTTTACCGTGGATGTGCAATCAACCTACTGAGGACAACACCAGCTGCTGCAATCACATTCACCAGTTTTGAAATGATCAACCGTTTTCTTGTTTCACGTTTTCCTTCAGATACACATCCTTCTATTTTGTGA 945 0.4476 MSNTHAPISKGLLCNAGAGAAAGVIAATFVCPLDVIKTRLQVQGTPQLPNATVKGSFIVGSLEQIVQREGLRGMYRGLAPTVLALLPNWAVYFTIYEQIKSLLSSRDENCCLSVGANVVAASGAGVATTFATNPLWVVKTRLQTQGIRPGVVPYKSTISALRRISREEGIRGLYSGLVPALVGVSHVAIQFPTYEKIKFYLAKQDDKAMEELGACEVAIASSISKFFASTLTYPHEIIRSRLQEQGHHSEKRYSGATDCVRKVFQQEGISGFYRGCAINLLRTTPAAAITFTSFEMINRFLVSRFPSDTHPSIL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0408 314 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 2 312 - -
Lal24g0408 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Lal24g0408 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 102 IPR018108 -
Lal24g0408 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 300 IPR018108 -
Lal24g0408 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 2 312 IPR044712 GO:0006862|GO:0055085
Lal24g0408 314 Pfam Mitochondrial carrier protein 213 303 IPR018108 -
Lal24g0408 314 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Lal24g0408 314 Pfam Mitochondrial carrier protein 13 105 IPR018108 -
Lal24g0408 314 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Lal24g0408 314 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Lal24g0408 314 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
Lal24g0408 314 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Lal24g0408 314 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Lal24g0408 314 SUPERFAMILY Mitochondrial carrier 13 296 IPR023395 -
Lal24g0408 314 Gene3D Mitochondrial carrier domain 107 305 IPR023395 -
Lal24g0408 314 Gene3D Mitochondrial carrier domain 1 106 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0408 Lal-Chr24 2916943 2922275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0408 2 308 Chloroplast and Mitochondria Gene Families AT2G47490 73.941 1.36e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0408 K15115 - zju:107426265 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0408 24 2916943 2922275 Lal24g0408 24 2916943 2922275 ECH