Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0407 ATGGCGGCATTGTCGTTTTCAGTGGCATCTGTGGTAGAGGATGTGCTTCAACAGCATGGTACTCGTCTCAAAGATCTTGATTTGGAATCTAGGAAAGCAGAAGAAGCTGCATTTAGAAGATATGATGCAGCAGGGTGGTTGAGGAAATTGGTTGGAATTGTTGCAGCTAAAGATTTACCAGCAGAGCCATCCGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATCCTATGCAATGTTCTTAATAAGGTTAAACCCGGTGCTGTACCAAAGGTTGTCGAAAGTCCTGTTGATTCTGCATTAATCCCTGATGGGGCACCATTATCAGCATTTCAGTATTTTGAGAATGTGAGGAACTTTCTGGTGGGTATTGAGGAAATTGGAATTCCTAGCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCAGCCAGGATTGTGAACAGTGTATTGGCCCTTAAATCCTACAATGAATGGAAACAGACCGGGGCGAATGGTGTGTGGAAATTTGGTGGGACTATCAAACCAACAACCTCTACAAAATCTTTTGTGAGAAAAAACTCGGAACCATTTACTAATTCCTTGTCAAGGAACTCCTCCACCGATGAAAAATCTCTTGCCGGTTTTAAGTCTGATGTTGAGTCTAATAAAATGTCTGGTTCTTATTCCTTGAGTATGCTTGTTCGTTCAATTCTAATAGATAAGAAGCCAGAAGAAGTTCCATCGTTGGTTGAATCTGTTTTGAATAAGGTTGTAGAGGCGTTTGAGCATCAAATTGTAAGCCACTGTGAACAGACAAAAATAACTTCAAGAGGTTCTGTTTCTCAAAGCAATGGATCCTTATCCAAGTTTGTTGTGGCAGATAAAAAGGTGGAGAATAAGATTCCAATGTTAACAAAGAAAGAGGGATTCATCCATAAAATCCATGTTGCCGATGAGGAGTCACAAAGACAACTTTTGAAGAAGCAGATGCTCTTTGATCAACAGCAAAGAGATATTCAGGAACTAAAGCACACAGTTCACACCACAAAAGCTGGTATGCAGTTTATGCAAATGAAATTTCATGAGGAGTTCTCAAATCTCGGTATGCACATTCATGGCTTAGCTCACGCTGCTTCAGGATATCATAGAGTTCTTGAAGAAAACCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGAGTGTACTGTCGAGTAAGACCCTTCTTATCTGGACAACCAAACTTTGTGAGCTCAGTGGATAGCATAGAAGATGGAACTATCACAATTAGTATTCCTTCAAAGAATGGGAAAGGACGAAGATCCTTCAACCTCAACAAAGTCTTTGGACCATCTTCTGACCAATTGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGACGGTTTTAACATTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCGAAAGTGATTACTGAAAAAAGCCAAGGTGTAAATTATAGGGCTCTAAGTGATTTATTTCTTACAGCAGATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAAATGATTGAGATATATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATATCCTTTTACCAAAATTCGTAATAATTCAAATAAAGGGCTCAGCGTGCCAGATGCAAGCCTGATCCCAGTATCATCAACAAATCATGTTATTGATCTAATGAACCTGGGGCAAAGGAACCGTGCAGTTGGAGCAACCACCCTTAATGACCGTAGTAGCCGGTCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAGCTCTCCTACGTGGATGCATGCATCTGGTTGACTTGGCAGGAAGTGAGAGGGCTAGCAAATCGGAGGCCACGGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGCGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCCTACAGAAATAGCAAACTTACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGATGCTTATGTTTGTTCACATAAGTCCAGAGGCTGATTCTATTGGAGAAACAATTAGCACCTTAAAATTCGCAGAAAGAGTTGCTACTGTTGAACTTGGAGCTGCAACAGTAAACAAGGACGTTGCTGATGTTAAAGACCTCAAAGAACAGATTGCGAGCCTTAAGGCAGCATTGGCAAGAACGGAAGTGAAACCAGACCATTCCTTATCTGCCAGCTCTGGAAAATATAGGATAAAGAAGGCTAGTGAGCTATCGCCTTATCATGCAACCCACCGAAGTGCAGACATTGTTGGTGATCTTGGGTGCCGGCAACCAATGTTTGATGTAGGCAACTTAGAGCTTCACAGTGATATCACATTGAGGCAAAAGAGTCAGAGCTTTGATATTGATGAGATATCGGCAAATTCACCACCCTGGCCCCCGGTAAAAAGTCCGGGACAAACCTACAGGGAGGATGATGGAGAGACTGTATCAGGAGAATGGGTTGATAAGGTGATGGTAAACAAGCTAGATGTAAACAACACTGAGAGCATGTTAGAGTGTTGGGAAGCAGAAAACGGGCACTTATCTGATATCTTTTATCAGAAATATCTCCGAGCTTCTTCTAAAATATACTCACAACAATCCGACAGTATGTTCACGGGAGGCAACCAGTTTAACATTGTAGGGTCGGATGATCTTGATGCTGCAACCAGCGATTCCTCTGAACCTGACTTACTTTGGCAATTTAATCATTCCAAATTTACCACCTTAGCCAATGAAAATAGATCAAAGGCTAGAAAATCTGTCTCAAAGTCAGCAAAAAGCCCAGAATTGAGCAAGAATGCAATCAATTCTCCTCTTGGTCCTTCACCTTCAAGGAAACAAGCAAATGGTGTATTACATCGAACAGGAAGACATCCTGCTCCAGTTGACATGAAACGCAAAACTGGGAGTAGAAAGTAA 3027 0.4153 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAAFRRYDAAGWLRKLVGIVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVKPGAVPKVVESPVDSALIPDGAPLSAFQYFENVRNFLVGIEEIGIPSFEASDLEQGGKSARIVNSVLALKSYNEWKQTGANGVWKFGGTIKPTTSTKSFVRKNSEPFTNSLSRNSSTDEKSLAGFKSDVESNKMSGSYSLSMLVRSILIDKKPEEVPSLVESVLNKVVEAFEHQIVSHCEQTKITSRGSVSQSNGSLSKFVVADKKVENKIPMLTKKEGFIHKIHVADEESQRQLLKKQMLFDQQQRDIQELKHTVHTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQPNFVSSVDSIEDGTITISIPSKNGKGRRSFNLNKVFGPSSDQLEVFSDMQPLIRSVLDGFNICIFAYGQTGSGKTYTMTGPKVITEKSQGVNYRALSDLFLTADQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFTKIRNNSNKGLSVPDASLIPVSSTNHVIDLMNLGQRNRAVGATTLNDRSSRSHSCLTVHVQGRDLTSGALLRGCMHLVDLAGSERASKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKMLMFVHISPEADSIGETISTLKFAERVATVELGAATVNKDVADVKDLKEQIASLKAALARTEVKPDHSLSASSGKYRIKKASELSPYHATHRSADIVGDLGCRQPMFDVGNLELHSDITLRQKSQSFDIDEISANSPPWPPVKSPGQTYREDDGETVSGEWVDKVMVNKLDVNNTESMLECWEAENGHLSDIFYQKYLRASSKIYSQQSDSMFTGGNQFNIVGSDDLDAATSDSSEPDLLWQFNHSKFTTLANENRSKARKSVSKSAKSPELSKNAINSPLGPSPSRKQANGVLHRTGRHPAPVDMKRKTGSRK 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0407 1008 Gene3D Kinesin motor domain 391 764 IPR036961 -
Lal24g0407 1008 MobiDBLite consensus disorder prediction 994 1008 - -
Lal24g0407 1008 SMART kinesin_4 394 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0407 1008 Coils Coil 731 758 - -
Lal24g0407 1008 Coils Coil 16 36 - -
Lal24g0407 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 758 IPR027417 -
Lal24g0407 1008 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1005 - -
Lal24g0407 1008 SUPERFAMILY Calponin-homology domain, CH-domain 43 170 IPR036872 -
Lal24g0407 1008 Pfam Calponin homology (CH) domain 43 159 IPR001715 GO:0005515
Lal24g0407 1008 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Lal24g0407 1008 MobiDBLite consensus disorder prediction 962 980 - -
Lal24g0407 1008 SMART ch_5 39 157 IPR001715 GO:0005515
Lal24g0407 1008 MobiDBLite consensus disorder prediction 825 848 - -
Lal24g0407 1008 MobiDBLite consensus disorder prediction 946 1008 - -
Lal24g0407 1008 ProSiteProfiles Kinesin motor domain profile. 396 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0407 1008 Gene3D - 24 187 IPR036872 -
Lal24g0407 1008 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0407 1008 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0407 1008 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0407 1008 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0407 1008 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1005 - -
Lal24g0407 1008 Pfam Kinesin motor domain 420 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0407 Lal-Chr24 2905621 2912302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0407 384 724 Calmodulin-binding Proteins AT5G65930 40.751 4.23e-73 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0407 K10406 - gmx:100801279 1617.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0407 24 2905621 2912302 Lal24g0407 24 2905621 2912302 ECH