Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0393 ATGTCTCGTGTCGCAGTGAAGGGGAAGAAGAAGGGAGCGACATTCGTGATAGAATGCGCCAAGCCGGTGGAGGATAAGATCATGGACATCGCTTCTCTTGAGAAGTTTCTTCAAGAGAGGATCAAGGTTGGTGGCAAAGCTGGTGCACTCGGTGACTCTGTTACCGTTACTCGTGAGAAGACCAAGATCACCGTCACCTCTGATTCTAACTTCTCCAAAAGGTATCTGAAATACTTGACCAAGAAGTACTTGAAGAAGCACAACGTTAGGGATTGGCTTAGGGTTATTGCTTCCAACAAGGACAGGAATGTCTATGAGCTGAGATACTTCAACATTGCAGAGAATGAGGCTGAAGAGGAAGACTAA 366 0.4617 MSRVAVKGKKKGATFVIECAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEAEEED 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0393 121 Pfam Ribosomal L22e protein family 11 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lal24g0393 121 PANTHER 60S RIBOSOMAL PROTEIN L22 4 121 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lal24g0393 121 Gene3D - 2 121 IPR038526 -
Lal24g0393 121 PANTHER 60S RIBOSOMAL PROTEIN L22-2 4 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0393 Lal-Chr24 2832843 2834244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0393 1 121 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.065 4.92e-63 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0393 K02891 - cit:102631252 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0393 24 2832843 2834244 Lal24g0393 24 2832843 2834244 ECH
Lal12g0274 12 1955634 1961778 Lal24g0393 24 2832843 2834244 LSH