Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0381 ATGGGAAAGAAATCGTTGAAGCTACCATCTCTTTTCAAAACCAAAGAAGCACCACCAAGAAAGCAGAAACACTATCCATGGCAATTGTTACCCTCTTGTAGCCACCCAAAGACCCTCTCTTTTCGTGCTGGTGATGACATCTTCAAGACAGTTAACTCTGTATTCTTTGATCCTTCTTCAGAAACCAACACTGTAACTCCTGAGTCATGGTTCACAACCTCATCTGAATCTCCAAGCTTCTCATCTGAGTCAGAGGAGTATTGCCACTATGATGCTGAGTCTTTGGATATGTTGGTACGTGGTGTTAGATCAAAGAGGCTGTTTTTTGAGCCTGGTGACACAAGTTCTATATTGGAAAAAGCTAAAGCTATTGGTTTTCCTTTCAAAGAAAGTGTGGTCCTTGCTATGGAATCACAGGACCCATATCAAGATTTTAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTTAAAGATTGGGAAGGTTTGGAAGAACTTTTGGGTTGGTATTTGAAGGTGAATGGTAAGAACAATCATGGATTTATTATTGGTGCTTTTGTGGATTTACTTATTAGTATGGCAGCTTCTAATTCTTGTTCTGATTCAACTACTAATTATTCTTCTGCTGTTTCTTCATTTTCTACTTCTTCTCCTTTGTGTCTACATGAGAGACAGAGTGAGATTATTGAACTTGAGGAGCATGAAGATACTGTAACATCTTAG 726 0.3912 MGKKSLKLPSLFKTKEAPPRKQKHYPWQLLPSCSHPKTLSFRAGDDIFKTVNSVFFDPSSETNTVTPESWFTTSSESPSFSSESEEYCHYDAESLDMLVRGVRSKRLFFEPGDTSSILEKAKAIGFPFKESVVLAMESQDPYQDFKRSMEEMVESHGVKDWEGLEELLGWYLKVNGKNNHGFIIGAFVDLLISMAASNSCSDSTTNYSSAVSSFSTSSPLCLHERQSEIIELEEHEDTVTS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0381 241 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 218 IPR038933 GO:0045892
Lal24g0381 241 ProSiteProfiles OVATE domain profile. 134 193 IPR006458 -
Lal24g0381 241 MobiDBLite consensus disorder prediction 60 82 - -
Lal24g0381 241 MobiDBLite consensus disorder prediction 1 23 - -
Lal24g0381 241 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 132 194 IPR006458 -
Lal24g0381 241 Pfam Transcriptional repressor, ovate 138 194 IPR006458 -
Lal24g0381 241 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0381 Lal-Chr24 2752942 2753667 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal24g0381 Ovate 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0381 - - mtr:MTR_1g111640 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0183 20 1279042 1279740 Lal24g0381 24 2752942 2753667 ECH
Lal11g1259 11 16268751 16269464 Lal24g0381 24 2752942 2753667 ECH
Lal13g1355 13 12772546 12773304 Lal24g0381 24 2752942 2753667 ECH
Lal24g0381 24 2752942 2753667 Lal24g0381 24 2752942 2753667 ECH
Lal12g0475 12 3403456 3404175 Lal24g0381 24 2752942 2753667 LSH