Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0377 ATGGCTCATGATTCTCGTCGCAAGCATCATCGATCGTCCTCTTCCGATAACGTCGACAAATCATCCAAGCGCCACAAGCATCGCCACCACTCCCACCGTCACGACAGCAAACGACGCGATGAACAAACTGAAAACGATGTCGAAACTTCGGTTCCTTCTCCATTTCCAATTTCTAATCCCGCTCACGACGACGTGGAGGAGGGGGAGATTCTTGAAGACAACGGTGATGCCGAACCTGGTGAAATTGAGGTTTCTGGAGACCGAGATCAAGATTCTCGATCTGATAACAAGAATCTGGGACTTGTGGCTAAAAGTTCAAAAACTAGAAGTGAGGACATTGACAATGTTAAGTTTATTAGTCATGAAGATGATGGTTATCCTAATCATTCAAGCGATGGGCATCAAGATAGGAAGGATGGTAGAGCTAGATCAGATGGTGCCGGCAATGAGTATTTGGATCGTAAATTTTCCAAAGGGGATAAGAGGAAGAATGGGGAACTTGTATGTTTTAAAGGAGATGAGCAACTAAAAGATGATTATGGTGATGAACCACTCGAGGCTAATGGAAGGATTATCAATAATCACTGGAATTCATCCTCAGAAAGTGGAGGAGAAAAATATAGAATGATCGTAAATTCTCCGCATGATAGATACAGAAGTCAATCAAGTGGTCATAACAGGGAAAGGTCTCGTTCTCGAAGTATAGTTGATGAACATGCTCATTCTAAGAGAATGCACTCTGAGGAACAAGGGACCCATGATTATACAAACAAACATAAGTCTGACTATGATTACGTTGATGAGGAAAGAACGAAGCCATACCGAAAGGAGCATCGCCATCACAGTATAGATTTGGTGGTAGATGATAGAAGGGAACACAGCAGCAGATATCACAGTCGGGAGGCCCATGATAGGGATATAAGTCAGGATAGAGACTTACCCAGGGAGAACAAACGAGGGGAAACAAACAGGAATAGGGAGGTTGAATTGGTGCGTAGAATGGAGAAGGAGCGTGGAAGGAGCAAGGAAAGGGATAGTAGGGATGTTGAAAAAGTTAAGATCAGGGATAGGGAGGAGGTTAGGGATAGGAGACGAGAAAAGGAAGGAGATAGGAGCTTGGAGGCAGTGTATGAGAGGGACAGGAGAAGAGGAAAGGAGAGAGATAGGAGTACAGATAGAGCAAGGGGTGGTGAGAGAGAAAGATATTGGGAGAGTGAAAGAGGTGATATAAATTGTGAACGGTATTACATTAAGGAGGGAGACAGACGAGATGATAGATTTAGGTACAAGGGTAGAGACAATGCGAATGGCAAGGATAAGGATCTGCATCATGATGATTGGCACAACAATCAAGATAGATATAGAAAATATTCAAGGCATGAAGAAACTGAATACCCTCGGGAGAGAAAAAGAATTTTCGATCCTGTAAAAGATTTTAAATCTATGGGAAGTACCACGGAAGAGGATGAAAGCAAACTTGAAATAGGTGAGATTGAACAAGATGATATTGATGAGGATACATTGCAACCTGAACAAGAAGAAGACGATATCAACTGGATCAAAGAGGAGAGTAGGAGGAGAAGAGAAGCCATAATGGAGAAATACAAGAAGCAGCATCAGCAATTTGAACAAGTAGTTGAAAATGAAGGGAAAGATACGAAACCTATGGACATTCCTGAAGCACTTGATGTTAAGAATGATGGAGCTGATGATTCGGAGACACCATTTGCTGTTGGGAAGTCTCCTGAAAATTTGAAAGATACTTCTGAGAATATATCTGGTGCTCGGGGCCTGGGAGAGGGCACTCCAAAGAGCGAGAGATCAGCTGACAAATTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCTGGGAGAGCAGATGGTTTACTGATTGAGAGTGTTGGACTACATGACAATTGGGATGATGCAGAAGGCTATTACAGCTATCGTTTTGGTGAAATACTCGATGGCCGATATGAAGTCACTGCTGCACATGGGAAGGGTGTCTTTTCAACAGTTGTTCGGGCAAAGAATCTTAAAACTGGTAATGGAGAACCAGAAGAAGTAGCTATAAAAATTATTCGCAACAATGACATCATGTACAAAGCTGGTATGGATGAGTTGATTGTGTTGAAGAAATTAGTGGGTGCAGATCCGGATGATAAGCGTCACTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAACATGAATCTTCGTGAGGTTTTAAAGAAATTTGGTCGCAATATTGGCCTTAGGCTAAGCGCTGTGAGAGCATATGCAAAACAACTATTTATTGCACTGAAGCATCTACGCAACTGTGGTGTTCTCCATTGTGATATAAAACCAGATAATATGTTGGTGAATGAGGCTAAAAATGTGTTAAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAGGAACGAAGTTACACCATATCTTGTGAGCCGCTTTTATCGTGCCCCTGAAATAATACTTGGATTGCTGTATGATCATCCATTGGATATTTGGTCTGTCGGCTGTTGTCTATATGAGCTTTATACAGGGAAAGTTCTTTTTCCAGGGCTTACAAACAATGACATGCTACGACTTCACATGGAATTGAAGGGCCCTTTTCCAAAGAAAATGCTACGTAAGGGAGCGTTTACTGAACAACATTTTGATCAGGACTTGAATTTTCTTGCTACAGAGGAGGACCATGTAACCCAAAAGATCATAAAGCGGATGATTCTCAACATAAAGCCAAAAGATATTGGAACAATCATCACTGGTTCTCCTGGGGAGGATCCAAAACTGTTATCCAACTTCAAGGATCTTCTGGAGAAAACTTTTGTCTTGGATCCAGACAAGAGGTTGACAGTCTCTCAAGCACTGAACCACCCATTCATCACTGGCAAGTGA 2946 0.4185 MAHDSRRKHHRSSSSDNVDKSSKRHKHRHHSHRHDSKRRDEQTENDVETSVPSPFPISNPAHDDVEEGEILEDNGDAEPGEIEVSGDRDQDSRSDNKNLGLVAKSSKTRSEDIDNVKFISHEDDGYPNHSSDGHQDRKDGRARSDGAGNEYLDRKFSKGDKRKNGELVCFKGDEQLKDDYGDEPLEANGRIINNHWNSSSESGGEKYRMIVNSPHDRYRSQSSGHNRERSRSRSIVDEHAHSKRMHSEEQGTHDYTNKHKSDYDYVDEERTKPYRKEHRHHSIDLVVDDRREHSSRYHSREAHDRDISQDRDLPRENKRGETNRNREVELVRRMEKERGRSKERDSRDVEKVKIRDREEVRDRRREKEGDRSLEAVYERDRRRGKERDRSTDRARGGERERYWESERGDINCERYYIKEGDRRDDRFRYKGRDNANGKDKDLHHDDWHNNQDRYRKYSRHEETEYPRERKRIFDPVKDFKSMGSTTEEDESKLEIGEIEQDDIDEDTLQPEQEEDDINWIKEESRRRREAIMEKYKKQHQQFEQVVENEGKDTKPMDIPEALDVKNDGADDSETPFAVGKSPENLKDTSENISGARGLGEGTPKSERSADKFCDDIFGETPTGVRKSGRADGLLIESVGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGKGVFSTVVRAKNLKTGNGEPEEVAIKIIRNNDIMYKAGMDELIVLKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLSAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGRNEVTPYLVSRFYRAPEIILGLLYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDHVTQKIIKRMILNIKPKDIGTIITGSPGEDPKLLSNFKDLLEKTFVLDPDKRLTVSQALNHPFITGK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0377 981 MobiDBLite consensus disorder prediction 191 206 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 492 512 - -
Lal24g0377 981 SUPERFAMILY Protein kinase-like (PK-like) 650 980 IPR011009 -
Lal24g0377 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Lal24g0377 981 SMART serkin_6 663 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0377 981 MobiDBLite consensus disorder prediction 81 95 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 427 491 - -
Lal24g0377 981 Coils Coil 532 552 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 220 402 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 1 402 - -
Lal24g0377 981 Pfam Protein kinase domain 665 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0377 981 Gene3D Phosphorylase Kinase; domain 1 633 722 - -
Lal24g0377 981 CDD STKc_PRP4 662 978 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lal24g0377 981 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 341 981 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 66 80 - -
Lal24g0377 981 Gene3D Transferase(Phosphotransferase) domain 1 723 979 - -
Lal24g0377 981 PANTHER DUAL SPECIFICITY PROTEIN KINASE 341 981 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 107 185 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 564 609 - -
Lal24g0377 981 MobiDBLite consensus disorder prediction 427 512 - -
Lal24g0377 981 ProSiteProfiles Protein kinase domain profile. 663 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0377 Lal-Chr24 2722177 2732878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0377 670 979 MAP Kinase Gene Family AT4G01370 33.856 5.83e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lal24g0377 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0377 K08827 - gmx:100784523 1284.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0464 13 2987953 2997825 Lal24g0377 24 2722177 2732878 LSH