Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0375 ATGGCGTCGCTGACGGCGTCGTTTCAGTATATGAGTTGGGAGGAAGTGTTGGTTTCGAATGAGAAGAGAAGAAGAGTGGTTCATTATTTTCTGAAGAAAAGAGATGAAAGCTTAGATCTGGCGGTGGTAGCTAAAGAGAAGAACTTTAGACACTTCTCTTATCACTGTGTGCTTTCTTCAATTGCTTCTTCATTCACTCTCTTTAATCCTAAATCTCGAAGAGATCTTGTTCTTTGGTTGGATTCCCTTGTTTCAGATTGGCCTGCTGAGGATGTATCTCATGCTGCCGAGGCTGCAGCCTTGAAGGATGATCAGTTGCGGAAGCTGGGCCACGACACAAAAGAGTTCTTGTGGTTAGGGTCTCCTTGGACGTGTAGGAAAAGAAGAAAGCACTACCAATCATTCCAAAAGAATGGTTTTAAGATATCTGTTTATGATTTTGTGTGTGTTTTAGCAGAAGACAAAAATCTCGTTGCTTACCTGGAAGACATGTATGAGGATTCTGGTGGCAATAAGATGGTTGTGGTACGATGGTTTTACAAAATTCATGATGTTGGCATTGTTCTGCCTGGCAGTTTTTGTGATAGAGAGGTTTTCTTTTCTCGTTATCTTCAAGATCTGAGTATTGAATGCGTAGATGGATTTGCTACTGTCCTCAACCCACAGCATTATGAGAGGTTTCAGAATGAGGCCAGACACACTCGCTTGGAACCCTTCATATGTGGCAATCAATTTGATAACAATGATTTGAAACCCTTTGATATAACTCAACTCCGGGGGTACTGGAAACAGGAAATAATAAGATATATGTATACCTTTTTTGACTCAAAGTCTAATGGGAGTTCTGGGCAATCTGATGATAGCCAAGAGAGCCTCCAACATAATGCTTCGGTCAGATATAAGAAGAGGCTGCACTCTGTAAAAATTGATCATAAGGATGTGCTTGATATAGCTGCTGATAAATTGCAATATTTGAGTAATACAAGGATTGATACAAAAGCTGGTGTGGTAAACAACTCCTCAGTAACGGTTGCTCCAAACAATTTAGTTGTAGGTTCCCAAGTGGAGGTCCTCTCTCAAGACAGTGGAATCAGAGGTTGTTGGTTTAGAGCTTCTGTCATTAAGAAGCACAAAAATAAAGTTAAGGTGCTATATCAGAATATTCCAGATGCAGTTGATGAGACTAAGAAGCTTGAGGAATGGGTTTTAGCTTCCAAAATTTTGGTGCACGATGAACTGAGTCTACGAATGTATGGGAGGACCAGGATCCGGCCAGCCTCACCATCCCCTAAATTTGAAATGTTGCTGGGGGTTGATGTTGGTTCCATTGTTGACGCATGGTGGCATGATGGATGGTGGGAAGGCATCATCATTCATAGAGAGTCTGAAGCTAATTATCATGTGTATTTCCCAGGCGAAAAGTTGGTGTCAGTTTTTGATCTTGATAACCTAAGGTGTTCTCTGGAATGGACAGGTAATGAATGGGTGAATGTAAGGGGCAGGCCTGACCTTGTAACTTCTTTATTGTCAAGCTTAAAAACAAAACAAGATCCCTGCAAATCTCATGACAGAAAATCGACCATTTCCTCCATCGTTGATGTCATACAATCAAAGCAAGGTGACACTTGCTTGGATTCTGAAAGGGAAAAGCCTAGAAAGCATGAGGTGTTTCCAGATCTCTTGAATGATGGTCTGCTTTCTCAGTTAAGGTGGAAGTCATCTAGGAAGAGGAGACGTGGTAATGGTAGCTACTGTGGGAAGCTACAATGCAAGGACAATGAAAAGAATGCGTCCCCAAACACACCAGAATCCCATGCTTCTGACAGATTTATAATTCCAGCATCCTTTCAAGTTGAACATGACATGGTTATGCCCTCTTTAACTAACATGGTTGTGTGTAGGTGA 1905 0.4152 MASLTASFQYMSWEEVLVSNEKRRRVVHYFLKKRDESLDLAVVAKEKNFRHFSYHCVLSSIASSFTLFNPKSRRDLVLWLDSLVSDWPAEDVSHAAEAAALKDDQLRKLGHDTKEFLWLGSPWTCRKRRKHYQSFQKNGFKISVYDFVCVLAEDKNLVAYLEDMYEDSGGNKMVVVRWFYKIHDVGIVLPGSFCDREVFFSRYLQDLSIECVDGFATVLNPQHYERFQNEARHTRLEPFICGNQFDNNDLKPFDITQLRGYWKQEIIRYMYTFFDSKSNGSSGQSDDSQESLQHNASVRYKKRLHSVKIDHKDVLDIAADKLQYLSNTRIDTKAGVVNNSSVTVAPNNLVVGSQVEVLSQDSGIRGCWFRASVIKKHKNKVKVLYQNIPDAVDETKKLEEWVLASKILVHDELSLRMYGRTRIRPASPSPKFEMLLGVDVGSIVDAWWHDGWWEGIIIHRESEANYHVYFPGEKLVSVFDLDNLRCSLEWTGNEWVNVRGRPDLVTSLLSSLKTKQDPCKSHDRKSTISSIVDVIQSKQGDTCLDSEREKPRKHEVFPDLLNDGLLSQLRWKSSRKRRRGNGSYCGKLQCKDNEKNASPNTPESHASDRFIIPASFQVEHDMVMPSLTNMVVCR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0375 634 Gene3D - 111 255 IPR043151 -
Lal24g0375 634 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 626 - -
Lal24g0375 634 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 5 626 - -
Lal24g0375 634 SMART agenet_At_2 347 415 IPR014002 -
Lal24g0375 634 SMART agenet_At_2 436 492 IPR014002 -
Lal24g0375 634 Pfam BAH domain 142 250 IPR001025 GO:0003682
Lal24g0375 634 Pfam Agenet domain 352 428 IPR008395 -
Lal24g0375 634 SMART BAH_4 140 256 IPR001025 GO:0003682
Lal24g0375 634 ProSiteProfiles BAH domain profile. 138 256 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0375 Lal-Chr24 2715292 2718989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0375 359 490 PHD Transcription Factor Family AT5G58610 30.216 3.01e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0375 - - gmx:100306709 702.205