Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0363 ATGGATGCTGCTACCGCTACCACGTTCCACCACCACCGCCGGAAAGATAAGGTGGTCGTCATCATGGGCGCCACCGGCTCCGGAAAATCGCGCCTTTCCGTCGACCTGGCCACCCTTTTCTTCCCTTTCTCCGAAATCCTCAACTCTGATAAAATGCAAGTATATTCCGACCTCGATATCACCACCAACAAGATCCCCATCCATCAGCGCCGCGGTGTCCCACACCACCTCCTCGGCGAGGTTGACCCCTCCGCCGGTGAGTTCTCCCCTTCAGACTTCCGCCACCGTGCCGGAGAAATAATATCCGATGTCATCAACAGAAGAAAACTCCCCATCATAGTTGGTGGTTCTAACTCCTTCATTCACGCTCTTCTGGTTGAACGATTCGACCCCGAGTTGAACATGTTTGACACTGAGTCATCGTCCCCATCATCACTCGTTATTTCTTCAGAGTTAAGATATAACTGTTGCTTCCTATGGGTAGACGTGTCATTTCCTGTGTTATCAGAGTATTTGATAAAGCGAGTTGATGACATGCTTGACTCGGGAATGGTAGACGAGTTGGCTCAGTTCTTCGACCCGAATGCGACTGAAGAAATGAACCGAACCGGGTTGAGAAAAGCGATTGGAGTACCAGAGTTGGACGGGTTTTTTAAAGAACACCCACCCGGTTCGATAAAGGATGAGGATCGTGTGTGGAAGGGTGCATACAATGAAGCAGTGAGGGCGATTAAGGATAACACGTGTAAGCTGGCGAAGAAACAGATAGGGAAGATTTTAAGGCTGAAAAAGGCTGGGTGGGACCTACACAGGATTGACGCCACCGAAGCGTTTACGGCGGCGCTGACGTCAGATGATAGTTGGTCCGATATATGGGAGAGGCAAGTATTGGAACCAAGCGTCAAGATTTTGAACTGCTTTTTGATGGAGTAG 933 0.4984 MDAATATTFHHHRRKDKVVVIMGATGSGKSRLSVDLATLFFPFSEILNSDKMQVYSDLDITTNKIPIHQRRGVPHHLLGEVDPSAGEFSPSDFRHRAGEIISDVINRRKLPIIVGGSNSFIHALLVERFDPELNMFDTESSSPSSLVISSELRYNCCFLWVDVSFPVLSEYLIKRVDDMLDSGMVDELAQFFDPNATEEMNRTGLRKAIGVPELDGFFKEHPPGSIKDEDRVWKGAYNEAVRAIKDNTCKLAKKQIGKILRLKKAGWDLHRIDATEAFTAALTSDDSWSDIWERQVLEPSVKILNCFLME 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0363 310 Gene3D - 15 308 IPR027417 -
Lal24g0363 310 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 10 309 - -
Lal24g0363 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 197 IPR027417 -
Lal24g0363 310 Pfam IPP transferase 148 256 - -
Lal24g0363 310 Pfam IPP transferase 53 127 - -
Lal24g0363 310 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 309 IPR039657 -
Lal24g0363 310 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0363 Lal-Chr24 2586795 2587727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0363 153 308 C2H2 Transcription Factor Family AT2G27760 32.222 1.57e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0363 K10760 - gmx:100813761 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0448 13 2846796 2847869 Lal24g0363 24 2586795 2587727 LSH