Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0354 ATGATTTGTGTTGTGCTGCTGCATGTGTTTTGCTTCCTTGTGTTTTCAAGTCTTGTACAATTGGTGTCAGCTACAAAATGTTTACCTTCACTTAACTGTGGAGATCTCGGCAAAATTAGTTTCCCTTTCACTGACACACAACACCAGGACTGTGGCATATTGATTATACATGGTTGTGATGATCCTGAACCTAATATCACAAAATCTATAAAGAACAATAACAAATGGTTTGATGTTGTCAACATTCAACAGTATTCGATTACGATTACAGACAATGATCTCCGCGAACTCTTGATGACAAAAAGTTGTGGTGTCTTCAGTTATGATTCAGCTTTCACTATTAGCTCACCTTTTGCTTCTTCTCAAACAAATTTTTACTCAAACCTTCTCACATGCAATCACATCCTTGATCCTAAGGACTTCAATTTTGCTTATAATTCTACGCTATGCGGAAATGATACTTTCTATGACATCGGAATGGCCTACAATAATTTCATAGGTTGCTCAATGGCTCAGCTTCCAGTGAGCTATGTTCGAGGTTCTAGTGACATTTTCGATGTGATAACTTATGAAGTCCAATTTGAAATAGTTTTGACTCCAGATTGTTTAACTTGTCACAATGTCCATGAAGGCCAATGTCGAGTTGATAGCAGTGGAAAGTTTTATTGTGACCAAGGAAATAGAGCAAAGATCTATAACATAGTGGCACCAGTTGCATCTGTGGCTGGAGCACTTGGAGTTGTGATAGTCTTGGCTTGGTGCTTTAGAAGACGCATTTGCAACAAGGAAAACCCAACCCACCAAATAATTGAGATGTTTCTGAAAGATCATGGTCACCTTGCAGCCAAAAGATACAGTTATTTGGAGATAAAGAAGGCGACGAACTCGTTCAGAAATAAATTAGGTAAAGGAGGATATGGTAGCGTATACAAAGGGAAGTTACATGATGGAAGTCTTGTGGCAGTAAAGGTGTTAAGTGAGTCCAAAGGTAATGGTGAAGAATTTATCAATGAAGTTGCTAGTATCAGTGTTACTTCTCATGTTAATATTGTTACTTTACTTGGATTCTGTTTAGAAGGTTCTAAAAGAGCTCTCATATATAAATATATGCCTAATGGATCAGTTGAGAAGTTCATATATAAAGTTAAGGAACCAACAAATATCAATCTTCATTTGAGTTGCAAGGGCATCTTTAACATCGCTCTTGGCGTTGCTCGTGGACTAGAGTATCTGCACAACGGTTGCAACACAAAAATCGTGCATTTCGATATAAAACCACACAACATATTGTTGGATGAGGATTTTTGTCCAAAGATTTCAGATTTTGGACTTGCAAAAATATGTAATAGACAAGAAAGTATTGTGTCCCTAGTGGGAACTAGGGGAACTGCAGGTTATATTGCTCCAGAAGTGTTCTCTAGAAATTTTGGTGGAGTGTCTCATAAATCTGATGTATACAGTTATGGAATGATGGTTTTAGAAATGGTTGGGGGAAGAAACAATATGAATGTTGAAGTTGAAGATGTAGATGAAGAATGTTCAAGTGATTTATATTTTCCACATTGGATTTACAAGCGTCTTGAAGTGAATCAGGATCTAGGATTGCAGATTGTTCAAAGTGAAAGTGATAAAGAAATGGCACTGAAGATTATCATAGTGAGCTTATGGTGCATACAAACTGATCCAAAAAATAGACCAACAATAAGCAAAGTGGTAGATATGATGGAAAGAAGCTTGGAATCCTTGCAAATACCACCCAAACCTTACCTTTGTTCACCTCTCAGATATACCTCAGGATCAACAGGTCCAATTACTGAGACATGTCAAACTTCATATCCTTCAGAGTATTAA 1851 0.3717 MICVVLLHVFCFLVFSSLVQLVSATKCLPSLNCGDLGKISFPFTDTQHQDCGILIIHGCDDPEPNITKSIKNNNKWFDVVNIQQYSITITDNDLRELLMTKSCGVFSYDSAFTISSPFASSQTNFYSNLLTCNHILDPKDFNFAYNSTLCGNDTFYDIGMAYNNFIGCSMAQLPVSYVRGSSDIFDVITYEVQFEIVLTPDCLTCHNVHEGQCRVDSSGKFYCDQGNRAKIYNIVAPVASVAGALGVVIVLAWCFRRRICNKENPTHQIIEMFLKDHGHLAAKRYSYLEIKKATNSFRNKLGKGGYGSVYKGKLHDGSLVAVKVLSESKGNGEEFINEVASISVTSHVNIVTLLGFCLEGSKRALIYKYMPNGSVEKFIYKVKEPTNINLHLSCKGIFNIALGVARGLEYLHNGCNTKIVHFDIKPHNILLDEDFCPKISDFGLAKICNRQESIVSLVGTRGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMVLEMVGGRNNMNVEVEDVDEECSSDLYFPHWIYKRLEVNQDLGLQIVQSESDKEMALKIIIVSLWCIQTDPKNRPTISKVVDMMERSLESLQIPPKPYLCSPLRYTSGSTGPITETCQTSYPSEY 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0354 616 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 33 615 - -
Lal24g0354 616 ProSiteProfiles Protein kinase domain profile. 295 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0354 616 Pfam Protein kinase domain 299 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0354 616 Gene3D Phosphorylase Kinase; domain 1 272 369 - -
Lal24g0354 616 SMART serkin_6 295 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0354 616 Gene3D Transferase(Phosphotransferase) domain 1 370 584 - -
Lal24g0354 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 33 615 IPR045874 GO:0004672
Lal24g0354 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Lal24g0354 616 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lal24g0354 616 SUPERFAMILY Protein kinase-like (PK-like) 279 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0354 Lal-Chr24 2513338 2516800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0354 27 594 Receptor kinase-like Gene Family AT5G38260 39.737 1.93e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal24g0354 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0354 - - gmx:100785979 780.4