LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal24g0351	ATGGTTTCGAGGTCGTATTCTAACTTGTTAGAGCTTACTTCCTGTGGGTCTCCAGCCTTTGGTCGCGAGAAGAAAAGGCTTCCTCGGGTGGCGACCGTTGCTGGAGTACTGTCTGAACTAGATGATGAAGCCAGCAACAGTGCTGGCTCTGATGTTCCCTCATCTATCTCTCAAGATCGGATGATCGTTGTTGGTAACCAGCTTCCGTTAAAGGCACACAGAAAAGATGATGGCACATGGGACTTCACCTGGGATGAGGACTCACTTCTCTTACAGCTGAAAGATGGTCTTGCTGATGATGTGGAAACTATCTATATTGGTTGTCTTAAAGAAGAAATTGAGCCTAGTGAGCAAGATGATGTTGCTCAATACTTGCTCGACACTTTCAAATGTGTGCCCACTTTCCTCCCTCCTGAGCTTTTTACCAAATTCTATCATGGATTCTGCAAGCAACATCTATGGCCTTTGTTTCACTACATGCTTCCGTTGTCACCTGATCTCGGTGGTCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCCGTAAACAAGATATTTGCGGATAAAGTGATGGAAGTTATTAACCCTGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTTCCAACGTTTCTGAGAAAGAGGTTTAACAGGGTGAGGCTAGGATTCTTCCTCCACAGTCCATTCCCTTCTTCTGAGATATACCGGACCCTTCCTGTTAGGGATGAACTTCTTAAAGCTCTTCTGAATGCTGACCTTATTGGATTTCATACTTTTGATTATGCCAGGCATTTCCTCTCTTGTTGTAGTAGGATGCTTGGGCTTTCTTATCAATCCAAGCGAGGCTACATTGGTCTTGAGTACTATGGAAGAACCGTAAGCATTAAGATTCTTCCTGTTGGTATTCATATAGGTCAGCTTCAGTCTGTCATGAATCTTCCTGAGACAGAAAGCAAGGTTGCTGAATTAAGAAATCGGTTCAAAGATCAAACCGTGATGCTTGGGGTGGATGACATGGATATCTTTAAAGGGATCAGCTTAAAACTTCTGGCCATGGAACAGTTACTCCTACAACATCCTGAAAAGAGGGGGAAAGTCGTTCTTGTCCAAATTGCAAACCCTGCAAGAGGCCGGGGGAAGGATGTGCAGGAGGCGCAGAGTGAAACTTATGCCATGGTGAAAAGGATAAATGACACATTTAGAAGGCCTGGATACACACCTGTAGTCTTGATTGATACACTTCAAAGTTATGAGAGAATTGCGTATTATGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCGTATGAATATGTCATTTGTAGACAAGGAAATGAGAAGATAGATGAGATTTTAGGGATAAGCCCGTTTACCCAAAAGAAGAGCATGCTGGTTGTGTCTGAGTTCATAGGGTGCTCTCCATCACTTAGTGGGGCAATTAGAGTGAATCCATGGAATATTGATTCTGTTGCTGAAGCTATGGATTCTGCACTAGTAGTACCAGAGTCTGAAAAGCAGATGAGGCATGAGAAGCATTATAGGTATGTCAGCACACATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAGGGATCATCTGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGGTTTCGGGTAATCGCTTTAGATCCAAACTTTAGAAAGCTGTCAGTGGAACATATTGTTTCAGCTTATAAGAGGACCAAGCACCGAGCAATTCTTTTGGATTATGATGGTACCATGATTCAGCCTGGATCAATTAGTAACACACCTAATGCTGAAGCTGTTGGCATCTTGAACAGTTTGTGCAAGGATCCCATGAATTGTGTTTTCATTGTAAGTGGAAAGGAGAGAAAGACTCTTACTGAATGGTTTTCTTCTTGCGAAATGCTGGGAATGGCTGCTGAGCATGGTTATTTTGTAAGGACTAATCAGAAGGCAGAATGGGAAGCTTGTGTTTCTGTGTCTGATTTCGAATGGAAACAGATTGCTGAGCCAGTAATGCAGTTATACATGGAGACGACAGATGGTTCAAACATAGAGGCCAAAGAGAGTGCTATTGTTTGGAACTACGAGTTTGCGGATCGAGATTTCGGTTCATGCCAGGCTAAGGAGCTTTTAGATCATCTGGAAAGTGTTCTTGCCAATGAGCCTGTTTCCGTTAAAAGTGGTCCACACATTGTGGAAGTCAAACCTCAGGGTGTGAGTAAGGGTATTGTGGCAGAACGTCTTCTTTCAACAATGCAACAAAAGGGAGTGGTTCCAGATTTTGTTCTATGCATTGGGGATGACAGATCAGATGAGGACATGTTCGAGGTAATAGCGAGTTCAAGGGCTTCTCTATCTCCCGTCGCCGATGTATTCCCTTGCACCGTTGGTCAGAAACCTAGCAAGGCGAAATATTACTTGGACGACACAGGTGACATTTGGAGAATGTTGCAAGGGCTTGCCAATGCTTCTGAGTAG	2523	0.4364	MVSRSYSNLLELTSCGSPAFGREKKRLPRVATVAGVLSELDDEASNSAGSDVPSSISQDRMIVVGNQLPLKAHRKDDGTWDFTWDEDSLLLQLKDGLADDVETIYIGCLKEEIEPSEQDDVAQYLLDTFKCVPTFLPPELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLKALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLPETESKVAELRNRFKDQTVMLGVDDMDIFKGISLKLLAMEQLLLQHPEKRGKVVLVQIANPARGRGKDVQEAQSETYAMVKRINDTFRRPGYTPVVLIDTLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYVICRQGNEKIDEILGISPFTQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDSVAEAMDSALVVPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMIQPGSISNTPNAEAVGILNSLCKDPMNCVFIVSGKERKTLTEWFSSCEMLGMAAEHGYFVRTNQKAEWEACVSVSDFEWKQIAEPVMQLYMETTDGSNIEAKESAIVWNYEFADRDFGSCQAKELLDHLESVLANEPVSVKSGPHIVEVKPQGVSKGIVAERLLSTMQQKGVVPDFVLCIGDDRSDEDMFEVIASSRASLSPVADVFPCTVGQKPSKAKYYLDDTGDIWRMLQGLANASE	840

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal24g0351	840	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	840	IPR001830	GO:0003824\|GO:0005992
	Lal24g0351	840	Gene3D	Glycogen Phosphorylase B;	312	527	-	-
	Lal24g0351	840	CDD	GT20_TPS	60	543	IPR001830	GO:0003824\|GO:0005992
	Lal24g0351	840	SUPERFAMILY	HAD-like	590	836	IPR036412	-
	Lal24g0351	840	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6	1	840	-	-
	Lal24g0351	840	Gene3D	Glycogen Phosphorylase B;	53	311	-	-
	Lal24g0351	840	Pfam	Trehalose-phosphatase	593	824	IPR003337	GO:0003824\|GO:0005992
	Lal24g0351	840	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	592	792	IPR006379	-
	Lal24g0351	840	Gene3D	-	589	706	IPR023214	-
	Lal24g0351	840	Gene3D	-	715	840	IPR023214	-
	Lal24g0351	840	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	60	547	-	-
	Lal24g0351	840	CDD	HAD_TPP	591	830	-	-
	Lal24g0351	840	Pfam	Glycosyltransferase family 20	60	543	IPR001830	GO:0003824\|GO:0005992
	Lal24g0351	840	TIGRFAM	T6PP: trehalose-phosphatase	588	836	IPR003337	GO:0003824\|GO:0005992

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal24g0351	Lal-Chr24	2501712	2505904	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal24g0351	1	836	Trehalose Biosynthesis Gene Families	AT4G17770	79.048	0.0	1418

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal24g0351	K16055		-	gmx:100782799	1563.9