Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0325 ATGAAGAAGATGGCAATCCACCATCATCACATCAATGACCAACTTGAACAACAACAACAACACAATGATAATGTTTCTTCAGTTCTTGAAGCTCTTTACTGCGATGAAGAAGAAGGAGAGTTATCTTCAGAAGAGAGTTATGTGACAACAACAACAACTACAAACAATGACAATACTTGTCTTCTTTTCCCTATGCTCTTGTTAGAGCAAGACTTGTTCTGGGAAGATGAAGAGTTAAACACTCTCTTCTCTAAAGAAAAGAATGAACATGAAATCTATTACAATAACAATAATCATGACAATGATATTAATAATAACGTGGGTTTAGATGACCATGCTCTCTCTGTGGCTCGTGGTGAAGCAGTTAAATGGATGCTAAAAGTGAATGCTTATTATGGTTTCTGTGCTCTCACTGCAACACTTTCTGTTACTTATTTGGATAGATTCCTTACCAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAGCTTGTAGCTGTTACTTGCATCTCTTTGGCAGCTAAAGTTGAAGAAACTCAAGTCCCTCTTCTCTTAGATCTTCAAGTGCAAGATGCCAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGTTGGTTGTGTTATCTACCCTAAAGTGGAAGATGCACCCAGTAACACCACTCTCATTTCTAGATCACATTATAAGGAGGCTGGGATTGAAAACAAATCTTCATTGGGAGTTTTTTAGGCGCTGTGAACATCTTCTTCTATCTGTGCTATTAGAGTCAAGATTTTCTGGTTGTCTTCCTTCTGTATTGGCCACTGCCACAATGCTGCATGTTATAGACCAGATTGAGCACAAGGATGGAATGGAATACAAAAATCAGCTTCTCAGTGTACTCAAAATTAGCAAGGAGAAAGTAGATGAGTGTTATAATGCCATTCTCCATCTTAAGGTTAAGGACTCCAATGCCAATAATTATGCTAATGAGAACCCTCTGAAGCGCAAGTTTGACCAAATCCATGGTAGCCCAAGTGGCACAATTGATGTTGCTTTTAGCTCTGATGGTTCTAACGATTCTTGGTCAGTGGGGTCATCATCATTATACACATCACCAGAGACAAAGCTTGTGTTGAAGAAGAGCAGAACCCAAGGCCAACAAATGAAATTGTCACCACTTAATAGGGTCATTGTTGGAATTGTTGGCACCTCTCCTTAA 1206 0.3914 MKKMAIHHHHINDQLEQQQQHNDNVSSVLEALYCDEEEGELSSEESYVTTTTTTNNDNTCLLFPMLLLEQDLFWEDEELNTLFSKEKNEHEIYYNNNNHDNDINNNVGLDDHALSVARGEAVKWMLKVNAYYGFCALTATLSVTYLDRFLTSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDAKYVFEAKTIQRMELVVLSTLKWKMHPVTPLSFLDHIIRRLGLKTNLHWEFFRRCEHLLLSVLLESRFSGCLPSVLATATMLHVIDQIEHKDGMEYKNQLLSVLKISKEKVDECYNAILHLKVKDSNANNYANENPLKRKFDQIHGSPSGTIDVAFSSDGSNDSWSVGSSSLYTSPETKLVLKKSRTQGQQMKLSPLNRVIVGIVGTSP 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0325 401 SMART cyclin_7 123 211 IPR013763 -
Lal24g0325 401 CDD CYCLIN 118 210 IPR013763 -
Lal24g0325 401 Pfam Cyclin, C-terminal domain 220 322 IPR004367 -
Lal24g0325 401 Gene3D - 219 310 - -
Lal24g0325 401 SUPERFAMILY Cyclin-like 74 218 IPR036915 -
Lal24g0325 401 ProSitePatterns Cyclins signature. 118 149 IPR006671 -
Lal24g0325 401 MobiDBLite consensus disorder prediction 1 21 - -
Lal24g0325 401 Pfam Cyclin, N-terminal domain 116 217 IPR006671 -
Lal24g0325 401 Gene3D - 116 218 - -
Lal24g0325 401 PANTHER CYCLINS 41 369 IPR039361 -
Lal24g0325 401 SMART Cyclin_C_2 220 352 IPR004367 -
Lal24g0325 401 PANTHER CYCLIN D3.1 PROTEIN 41 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0325 Lal-Chr24 2308314 2310804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0325 16 315 Core Cell Cycle Gene Families AT4G34160 53.333 9.22e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0325 K14505 - gmx:547740 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0325 24 2308314 2310804 Lal24g0325 24 2308314 2310804 ECH
Lal12g0409 12 2906137 2908184 Lal24g0325 24 2308314 2310804 ECH
Lal4g0132 4 824655 826647 Lal24g0325 24 2308314 2310804 ECH
Lal21g0217 21 1428124 1430020 Lal24g0325 24 2308314 2310804 ECH
Lal12g0409 12 2906137 2908184 Lal24g0325 24 2308314 2310804 LSH
Lal13g0405 13 2535872 2538092 Lal24g0325 24 2308314 2310804 LSH
Lal16g0233 16 1397711 1399795 Lal24g0325 24 2308314 2310804 PCT
Lal15g1257 15 14175067 14177312 Lal24g0325 24 2308314 2310804 PCT
Lal23g0189 23 1672243 1674788 Lal24g0325 24 2308314 2310804 PCT