Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0319 ATGAGCCTTAACTCACAGAATCTCCATTTGTGGTGGACACTTTCATTTTCATATTTTGTTCTTCTACTTCAATCTGTTCATGCTCTTAACCCTGATGGAGTTTTCTTACTTTCCTTCAAGTACTCCATCCTCAGTGACCCTTCATCAGTTTTAGAAAGCTGGAACTACAATGATGTAACTCCATGTTCTTGGAAAGGAGTTACATGCAGTGAAATTGAAGACCCTGGTAACCCTGACTTGTTCAGAGTAACTAGCTTAGTCCTTCCAAATAACCAACTACTAGGTTCAATCACTGAAGACTTAGGCATGATTCAACATCTTCAACATGTTGACCTCTCAAATAATCTCCTCAATGGGTCTCTACCAAACTCTTTATTCAACTCTTCTCAGCTTCAAGTCCTTTCTCTGTCAAACAATCTCATCACAGGTGAGTTACCTGAGTTGATTGGTAAACTAACAAGCCTTCAACTTCTCAACCTCTCTGACAATGCCCTTGGTGGTTTGATCCCAGAGAACCTCACTGCTTTGCAAAATCTAACTGTTGTTTCTCTCAGAAGTAACTATTTTTCTGGGAGAGTCCCAAGTGGGTTCAACACTGTTGAGGTTTTGGATCTCTCCTCAAATTTGCTCAATGATACTCTCCCAAATGATTTTGGTGGTGAAAGTTTGCACTACTTGAATCTCTCCTGGAACAAGATTCAAGGAGCAATACCACCAGAGTTTGCAAAACAGATTCCTGCAAATACTACAATTGATCTATCAAATAACATCCTAACTGGACCAATACCACAATCTTTGGCTTTGCTTAACCAGAAAAGTGATTTGCTTTCTGGGAATGAAAATCTTTGTGGGAAGCCTTTGAAGATTCTTTGCTCTATTCCCTCCACTTTGTCCAATCCTCCAACCAATGTCACAGACACATCTTCACCAGCAGCAATTGCAGCTATACCAAAAACAATTGACACAGACCCATCATCAAACTCAACACAAGGGCCTAATGGTTCTTCTCAAAATATTTCACCAAGTGGCCTAAAACCTGCTACCATAGCAGCCATTGTGGTAGGAGATTTAGCTGGCATATCTGTTATTGCTCTTATCATTCTCCTTGTCTATCAACAAAGACATAAAAGAGAACCAAAACCAACCACTGAAGCTGCTGCTGCTGCTACAAAAGAAAAGAAAGAAGAAACTGTTGCAAAACAAAACCATAATGTGAAAACACCCTCACTTCCTTGCTCATGCTTGAAAATCAAAGAAGAAGAGAGTGCTTCAGAAGAAACAAGCTCTGATAGTGACCATGACAACAACACCATAGACATCATCACAACACAAAATGGAGACATTACAAAACAAGGCACACTTGTAACTGTGGATGGTGAAATAAGGCTTGAGTTAGAGACTTTGCTGAAAGCTTCAGCTTATATATTAGGAACAAGCCGTGCCAGCATTGTTTACAAGGCAGTGCTTGAAGATGGGAGAGTCTTTGCTGTTAGAAGAATTGGTGAGTGTGGGATTGAAAGAATGAAGGACTTTGAGAACCAAGTGAAGTCCATTGCAAAATTTCGTCACCCCAATTTAGTTAAGGTTCGTGGCTTTTGTTGGGGTCAAGATGAGAAACTTGTTATTTGTGACTATGTTCCTAATGGAAGCCTTGCTAGCATTGGTTTCAGAAGGGCAAGTTCATCCCCTTTTAACATGTCCTTGGAGGTGAGGTTGAAGATAGCAAAAGGGCTAGCACGTGGCTTAGCATTCATTCATGAGAAGAAGCACGTGCATGGCAACATTAAACCCAACAACATCTTGTTAAACTCAGAAATGGAACCCATCATTAGTGATTTCGGCCTGAACCGGCTCCTATTGAATGACATCAACCATAGAGCAAACGGTTCAGCTAGACAACTATTACGGAACCAAAGAACCCTACAAGACCAACCCAATATTGGTTCTAGCCCCTATGCACCAACAATAGGGTCATCATCAAGTGGGGCCCACATGCCATACCAAGCACCAGAATCACATCAAAACATCAAACCTACCCCAAAGTGGGACGTGTACTCATTTGGCATTGTGCTGTTGGAGCTTCTAAGTGGCAGGGTTTTCTCAGACCGGGATTTGGACCAGTGTCCTGAACCCGGTTCAGTGGAAGAAGAGAAAAACCGGGTCTTAAGAATGGCTGACGTGGCTATCATGTGTGAAATTGAAGGGAGAGAAAATGCAGTATTGAGTTACTTCAAGTTAGGACTAAGTTGTGCCTCTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAGGCTTTACAAATCTTGGACAAGATCCCTCATGCTGCCATTTATTAG 2334 0.416 MSLNSQNLHLWWTLSFSYFVLLLQSVHALNPDGVFLLSFKYSILSDPSSVLESWNYNDVTPCSWKGVTCSEIEDPGNPDLFRVTSLVLPNNQLLGSITEDLGMIQHLQHVDLSNNLLNGSLPNSLFNSSQLQVLSLSNNLITGELPELIGKLTSLQLLNLSDNALGGLIPENLTALQNLTVVSLRSNYFSGRVPSGFNTVEVLDLSSNLLNDTLPNDFGGESLHYLNLSWNKIQGAIPPEFAKQIPANTTIDLSNNILTGPIPQSLALLNQKSDLLSGNENLCGKPLKILCSIPSTLSNPPTNVTDTSSPAAIAAIPKTIDTDPSSNSTQGPNGSSQNISPSGLKPATIAAIVVGDLAGISVIALIILLVYQQRHKREPKPTTEAAAAATKEKKEETVAKQNHNVKTPSLPCSCLKIKEEESASEETSSDSDHDNNTIDIITTQNGDITKQGTLVTVDGEIRLELETLLKASAYILGTSRASIVYKAVLEDGRVFAVRRIGECGIERMKDFENQVKSIAKFRHPNLVKVRGFCWGQDEKLVICDYVPNGSLASIGFRRASSSPFNMSLEVRLKIAKGLARGLAFIHEKKHVHGNIKPNNILLNSEMEPIISDFGLNRLLLNDINHRANGSARQLLRNQRTLQDQPNIGSSPYAPTIGSSSSGAHMPYQAPESHQNIKPTPKWDVYSFGIVLLELLSGRVFSDRDLDQCPEPGSVEEEKNRVLRMADVAIMCEIEGRENAVLSYFKLGLSCASLVPQKRPSMKEALQILDKIPHAAIY 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0319 777 Gene3D Ribonuclease Inhibitor 30 198 IPR032675 -
Lal24g0319 777 ProSiteProfiles Leucine-rich repeat profile. 130 152 IPR001611 GO:0005515
Lal24g0319 777 Gene3D Phosphorylase Kinase; domain 1 443 545 - -
Lal24g0319 777 CDD TM_EGFR-like 348 378 - -
Lal24g0319 777 Gene3D Transferase(Phosphotransferase) domain 1 546 775 - -
Lal24g0319 777 MobiDBLite consensus disorder prediction 320 342 - -
Lal24g0319 777 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 24 773 - -
Lal24g0319 777 SUPERFAMILY Protein kinase-like (PK-like) 475 768 IPR011009 -
Lal24g0319 777 MobiDBLite consensus disorder prediction 641 675 - -
Lal24g0319 777 PANTHER OS04G0122200 PROTEIN 24 773 - -
Lal24g0319 777 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Lal24g0319 777 MobiDBLite consensus disorder prediction 377 401 - -
Lal24g0319 777 Pfam Protein kinase domain 476 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0319 777 SUPERFAMILY L domain-like 32 289 - -
Lal24g0319 777 CDD STKc_IRAK 476 771 - -
Lal24g0319 777 ProSiteProfiles Protein kinase domain profile. 470 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0319 777 MobiDBLite consensus disorder prediction 319 342 - -
Lal24g0319 777 Gene3D Ribonuclease Inhibitor 199 293 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0319 Lal-Chr24 2247837 2251380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0319 26 771 Receptor kinase-like Gene Family AT2G15300 50.390 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal24g0319 Pkinase 2.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0319 - - gmx:100820334 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0319 24 2247837 2251380 Lal24g0319 24 2247837 2251380 ECH