Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal24g0297 | ATGGGTCACTCCAATGTTTGGAACTCTCATCCCAAGAATTATGGTCCTGGATCTCGCACTTGCCGTGTCTGCGGGAACCCACATGGATTGATCCGGAAGTATGGCCTTAATTGTTGCAGGCAATGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATCAAGTTGATAGTGTATTTTGATGCGCGTATGCTATTGTTTTATCACCGGTTCTCAGTATTTTGGTTTGTTTATGTTGTTGTTGCAGTATCGCTAAGGAGTTTTGGCCACCTGCCCAATCTGCTCTGGAATTAG | 291 | 0.4502 | MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLNCCRQCFRSNAKEIGFIKLIVYFDARMLLFYHRFSVFWFVYVVVAVSLRSFGHLPNLLWN | 96 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal24g0297 | 96 | Gene3D | 30s Ribosomal Protein S14; Chain N | 1 | 55 | IPR043140 | - | |
Lal24g0297 | 96 | Pfam | Ribosomal protein S14p/S29e | 7 | 54 | IPR001209 | GO:0003735|GO:0005840|GO:0006412 | |
Lal24g0297 | 96 | PANTHER | 40S RIBOSOMAL PROTEIN S29 | 1 | 54 | - | - | |
Lal24g0297 | 96 | PANTHER | 40S RIBOSOMAL PROTEIN S29 | 1 | 54 | IPR039744 | GO:0003735|GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal24g0297 | Lal-Chr24 | 2138327 | 2139587 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal24g0297 | 1 | 54 | Cytoplasmic Ribosomal Protein Gene Family | AT4G33865 | 94.444 | 5.40e-34 | 109 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal24g0297 | K02980 | - | pvy:116132547 | 124.02 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal12g0388 | 12 | 2756255 | 2757911 | Lal24g0297 | 24 | 2138327 | 2139587 | LSH | |
Lal13g0379 | 13 | 2392081 | 2393569 | Lal24g0297 | 24 | 2138327 | 2139587 | LSH |