Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0295 ATGAGTTGCAATGGTTGTCGTGTCCTTAGAAAAGGTTGCAGCGATGATTGCATGCTAAGACATTGCCTATTATGGATAGAGAATCCACAAGCACAAGCTCACGCCACCCTCTTTGTTGCCAAGTTCTTTGGCCGTGCCACCCTCATGTCTTTCATTTCTTCTGTACCCACCAATCAAAGATCTGCATTGTTTGAGTCACTTGTGTATGAAGCAGTAGGACGTACTATAAATCCAGTGAATGGAGTAGTGGGGTTGCTTTGGAGTGGAAACTGGCACTTGTGTCAATTGGGTGTAGAGAAAGTTCTCAAAGGTGGAAGCCCCTTGAACCCTAACCCTCATCATCATGAAGAGGTTGACAGAGTTATGGTTAGTCATCAAGCATCTCAGGAAGAATCTGAGACCACCACTTTGGGAAGTAGCACACCACAGGTTCATTCTGCTTCTCATAAAAAAACTCAAAGGAGGAAGCTTCTTACACTATTCTTCTGA 489 0.4417 MSCNGCRVLRKGCSDDCMLRHCLLWIENPQAQAHATLFVAKFFGRATLMSFISSVPTNQRSALFESLVYEAVGRTINPVNGVVGLLWSGNWHLCQLGVEKVLKGGSPLNPNPHHHEEVDRVMVSHQASQEESETTTLGSSTPQVHSASHKKTQRRKLLTLFF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0295 162 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lal24g0295 162 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Lal24g0295 162 MobiDBLite consensus disorder prediction 127 147 - -
Lal24g0295 162 MobiDBLite consensus disorder prediction 123 151 - -
Lal24g0295 162 PANTHER LOB DOMAIN PROTEIN 1 162 - -
Lal24g0295 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0295 Lal-Chr24 2124638 2126193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0295 1 136 AS2 family AT3G49940 63.235 5.88e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal24g0295 LOB 1.7e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0295 24 2124638 2126193 Lal24g0295 24 2124638 2126193 ECH
Lal16g0250 16 1490570 1491949 Lal24g0295 24 2124638 2126193 PCT
Lal15g1307 15 14926512 14927791 Lal24g0295 24 2124638 2126193 PCT