Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0280 ATGATATTGATAATCACTAAGATGCTTCTCTTCTACATCAACCATGTTGTGACCCCATTTCTTCTCCTTTCTATGCTGTTTGTATCGCTTACATCATCAACTCCCACTTATAACGGTTTATACTGTCCAAACAATACTAAATATGAAACCAACAACAACACTGTCTTCCAAACCAATCTCAATGTTCTTCTCTCTTGTCTCCTCTCTAACGCCACTCATGGCACCAGCTCCTACACCACTGCCATGGGCATGGGCAACTCCAACGCCGTCAACGGTGTTTACCTCTGCCGCGGCGATGTCTCCTCTGCAACATGTACAGAGTGCATGACCACCGCAGTCGCAAACATAAAAAACCTCTGCCCCAACAAGTCAGAGTCGATAATATGGTACGATGAATGCATGGTGCGTTACACAAACACCTACTTCAACCCTTTGAGCATTGACCCAAGATTGAACTTGTGGGAAAATGAAAGCATATCTACCTCGGAGATAGATGAGTTCAACGAAAAGCTTTTAAGCTTCTTGGGGAGTTTGGCTTCAGAAGCTGCGAATTCTGTGTCTGCGGTGAAATATTCCACCGGAGAATGGGATTTCACGGAGGAGATAAGAGTGTATGGATTGGCGCAGTGTGTTCCTGGCGTGACAAATGATCAGTGTGAAGGGTGTTTGGTAAATGCGAGTAGGACTCTTGAGACGTGTTGTGAAGGAAAAGAAGGTGCACGAGCTTTGCTTCCATGGTGTAATATCAGATATGATTTGTTCCAATTTTACAATACAAGTGGAACATCTATATCTCCTCCTCCTCCGGGAAAGAAGAAACTTGACACAAAAACAATTGCAATTATTGTTGTCGTTGTTGTCTTTTCAGTCATTCTCTTTTGTTTGGGCTGTGGTTTCCTACTGAGAAGAAGATTAAGGAAGAAATATAAAACTCTTCTGAAAGAAAACTTTGGGGATGAAGGTGCTGCTTTGGAATCATTACAATTTAGTTTAGCAGCAATTGAGGTTGCTACAAAAAAGTTTTCAAATGAAAACAAAATAGGCAAAGGAGGATTTGGAGAGGTTTACAAGGGTATTCTTTCAAATGGAAGAGAAATAGCTGTAAAAAAACTCTCTCAAAGTTCAGGACAAGGTGCAATTGAATTCAAGAATGAGGTTTTATTGATAGCTAAACTTCAACACAGAAATCTAGTGACATTATTAGGATTTTGCTTGGACCAACATGAGAAAATGCTCATTTATGAATATGTGCCTAATGAAAGCCTTGATTACTTTCTATTCGGTTCTCACAAGAGCAAATTATTGAATTGGTCCGAGCGTTACAGAATTATCAAAGGGATTGCACAAGGAATTCATTACCTACATGATCATTCGAGGTTGAAAATTATACATCGTGATCTCAAAGCAAGCAATGTGTTATTAGATAGCAGCATGAATCCAAAAATATCAGACTTTGGCATGGCAAGAATAATTGCTTTAGATCAAGATCGAGGAAGTACATGTAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCGGATGTATTTAGTTTTGGAGTCATACTTCTGGAAATAATTAGTGCAAAACGGAATGCACGTTCTATTTTTTCAGATGATTTGGATGACCTCTTGAGTTATGCTTGGAAACAATGGAGAGATGAAACACCATTAAAAATAGTAGACCAAGATATTAAAGAATCTTGCAATCATAGTGAAGTCATTAAGTGCATCCAAATTGGTTTATTATGTGTACAAGATAGACCCGATGATAGACCTACTATGGCCAAAATTGTTTCTTATTTCAGTACCACTCATTCTGAAGCTGAGTTGCCATATCCTGGACAACCAATCAATTCTATGCATAATCAAATACTGCAAAATATGGTAGCAGAGGAGTCAAGTTCAGTTTCTAAACAAGTCAATGAATTGTCTATGCCTAGATAG 1977 0.3859 MILIITKMLLFYINHVVTPFLLLSMLFVSLTSSTPTYNGLYCPNNTKYETNNNTVFQTNLNVLLSCLLSNATHGTSSYTTAMGMGNSNAVNGVYLCRGDVSSATCTECMTTAVANIKNLCPNKSESIIWYDECMVRYTNTYFNPLSIDPRLNLWENESISTSEIDEFNEKLLSFLGSLASEAANSVSAVKYSTGEWDFTEEIRVYGLAQCVPGVTNDQCEGCLVNASRTLETCCEGKEGARALLPWCNIRYDLFQFYNTSGTSISPPPPGKKKLDTKTIAIIVVVVVFSVILFCLGCGFLLRRRLRKKYKTLLKENFGDEGAALESLQFSLAAIEVATKKFSNENKIGKGGFGEVYKGILSNGREIAVKKLSQSSGQGAIEFKNEVLLIAKLQHRNLVTLLGFCLDQHEKMLIYEYVPNESLDYFLFGSHKSKLLNWSERYRIIKGIAQGIHYLHDHSRLKIIHRDLKASNVLLDSSMNPKISDFGMARIIALDQDRGSTCRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVILLEIISAKRNARSIFSDDLDDLLSYAWKQWRDETPLKIVDQDIKESCNHSEVIKCIQIGLLCVQDRPDDRPTMAKIVSYFSTTHSEAELPYPGQPINSMHNQILQNMVAEESSSVSKQVNELSMPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0280 658 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 638 - -
Lal24g0280 658 Gene3D Phosphorylase Kinase; domain 1 305 416 - -
Lal24g0280 658 CDD STKc_IRAK 347 612 - -
Lal24g0280 658 Gene3D - 37 142 IPR038408 -
Lal24g0280 658 Gene3D - 151 256 IPR038408 -
Lal24g0280 658 Pfam Salt stress response/antifungal 42 139 IPR002902 -
Lal24g0280 658 Pfam Salt stress response/antifungal 163 252 IPR002902 -
Lal24g0280 658 Pfam Protein tyrosine and serine/threonine kinase 343 611 IPR001245 GO:0004672|GO:0006468
Lal24g0280 658 SUPERFAMILY Protein kinase-like (PK-like) 326 645 IPR011009 -
Lal24g0280 658 ProSiteProfiles Gnk2-homologous domain profile. 36 142 IPR002902 -
Lal24g0280 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lal24g0280 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 638 - -
Lal24g0280 658 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0280 658 ProSiteProfiles Gnk2-homologous domain profile. 147 256 IPR002902 -
Lal24g0280 658 SMART serkin_6 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0280 658 Gene3D Transferase(Phosphotransferase) domain 1 417 623 - -
Lal24g0280 658 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0280 Lal-Chr24 1999028 2001917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0280 17 609 Receptor kinase-like Gene Family AT4G05200 46.819 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal24g0280 PK_Tyr_Ser-Thr 7.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0280 - - ccaj:109813299 862.448