Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0278 ATGTTTTTATTTCTTAGTATCCTTATCATACTCATACACCAAACCAATGCTCAGCCAGGATTCCTATACAACTTTTGTCTCAATGACAAAGGCAATTACACTGCTAATAGTAACTACCACAACAACCTTAATACCCTTTTGTCCAACCTCTCTACTAACACACAAATTGACTATGGCTTCTACAATTTCTCTTATGGCCTAGGCAATGATAAGGTTAATGCTATTGGGCTGTGTAGAGGAGATGTTAAGCCGGATAATTGTCGCAGCTGTTTAAATGATTCAAGAGTACTTCTCACACAACTTTGTCCAAATCAGAAGGAAGCAATTGGATGGTATGATAACTGCATGTTACGCTACTCGAATCGATCAATATTTAGCACCATGGAAAGCTCACCTACTTTCTATATGAGCAACCGTGGTAATGCAACAAATGTTGATCAATTTAATACAGTGCTGACAAACTTGCTAAATAGCCTACTAAGCCAAGCTTCATTAGGGGATTCGCGGCGCAAGTTCGCAATAGGGAATGTAACAGGACCGGGATTCCAAACAATATTTGGTCTTGTGCAGTGTACACCTGATTTGTCTGAACAAGAATGCAGTGATTGTTTGGTAGGGGCTATCTCACAAATTCCACAATGCTGTGATAACAAGAAAGGTGGTAGAGTTGTAACAGCAAGCTGTAACATCAGATATGAGATATACAGATTCTATGAACTTGCCAATGTTGCAACATCATCACCACCACCAAAAGTGCTTCCTCTTCCTCCCTCACCTACAGGAAATAGCAGCAACTCAAGAACTGTATTAGTAATAGCAATAGTTGTGCCAATTGTTGCCTTTGTCATACTGGTCATCATTATCTGCATCTGTTTAAGAATGAGGAAGTCAAGGAAACATATTGAAGATGAAGCTCAAAATGATGATGAAATTCAATCATCTGAGACATTGCAATTGGACTTTGCCACCATCATGGTTGCTACTAATAACTTTTCGGATGCAAATAAGCTAGGACAAGGAGGATTTGGACCTGTCTACAAGGGCACACTCTCCGATGGACAAGAAGTTGCAGTGAAACGGTTGTCCGTGAATTCCTCTCAAGGAGACATTGAGTTTAAGAATGAAGTGCTGTTAGTGGCCAAGCTTCAGCACAGAAATTTAGTTAAGCTACAAGGTTTCTGTTTGGAAAGAAAGGAAAGGCTACTAGTCTACGAGTTTGTTCCAAATAAAAGCCTTGATTTCTTCATATTTGATCAAGTGAAACGTGCACACTTGGACTGGGAAAGGAGGTACAAAATCATAGGAGGCATTGCTAGAGGTCTTGTTTACCTTCATGAGGATTCACGATTGCGCATTATTCATCGTGATCTCAAAGCAAGTAACATTCTCTTGGATGAAGTGATGAATCCTAAGATATCAGATTTTGGAATGGCAAGACTATTCGCAACAGATCAAACTCAAGGCAATACAAGTAGAGTTGTTGGAACCTATGGATATATGGCACCAGAGTATATGTTATATGGACAGTTCTCGGTGAAGTCTGATGTTTTTAGTTTTGGTGTACTTGTTCTGGAGATTGTAAGTGGCACTAAAAATAGTGGTGTCCATCGAGGGGAGAATGTAGAAGATCTAGTGACCTATGCATGGAGAAACTGGAGGGAAGGGACAGCCTCAAACATTGTTGATCCTACACTTACTGATGGTTCAAGAAATGAAATAATGAGATGTATGCACATTGGATTGCTTTGTGTTCAAGAAAATATAGCTGAAAGACCAAGCATGGCTTCAGTTTTACTCATGCTTAACAGCTACTCTGTTACTCTTCCACTGCCCTCACAACCTGCTTCATTTACCAATAGGAGAACTCTATCAACCAATCCCATCCATTCAGAAGAGTATAATTCAGGGGCAACAAAAAGTTCAAGTGAATCACAATTTCAATCTGTTCAAGCTTCAGTAAACGAAGCTTCAATTACCGAGCCATTTCCTCGCTAG 1995 0.398 MFLFLSILIILIHQTNAQPGFLYNFCLNDKGNYTANSNYHNNLNTLLSNLSTNTQIDYGFYNFSYGLGNDKVNAIGLCRGDVKPDNCRSCLNDSRVLLTQLCPNQKEAIGWYDNCMLRYSNRSIFSTMESSPTFYMSNRGNATNVDQFNTVLTNLLNSLLSQASLGDSRRKFAIGNVTGPGFQTIFGLVQCTPDLSEQECSDCLVGAISQIPQCCDNKKGGRVVTASCNIRYEIYRFYELANVATSSPPPKVLPLPPSPTGNSSNSRTVLVIAIVVPIVAFVILVIIICICLRMRKSRKHIEDEAQNDDEIQSSETLQLDFATIMVATNNFSDANKLGQGGFGPVYKGTLSDGQEVAVKRLSVNSSQGDIEFKNEVLLVAKLQHRNLVKLQGFCLERKERLLVYEFVPNKSLDFFIFDQVKRAHLDWERRYKIIGGIARGLVYLHEDSRLRIIHRDLKASNILLDEVMNPKISDFGMARLFATDQTQGNTSRVVGTYGYMAPEYMLYGQFSVKSDVFSFGVLVLEIVSGTKNSGVHRGENVEDLVTYAWRNWREGTASNIVDPTLTDGSRNEIMRCMHIGLLCVQENIAERPSMASVLLMLNSYSVTLPLPSQPASFTNRRTLSTNPIHSEEYNSGATKSSSESQFQSVQASVNEASITEPFPR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0278 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Lal24g0278 664 SMART serkin_6 331 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0278 664 MobiDBLite consensus disorder prediction 615 657 - -
Lal24g0278 664 Pfam Salt stress response/antifungal 140 234 IPR002902 -
Lal24g0278 664 Pfam Salt stress response/antifungal 26 121 IPR002902 -
Lal24g0278 664 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Lal24g0278 664 CDD STKc_IRAK 337 602 - -
Lal24g0278 664 Pfam Protein tyrosine and serine/threonine kinase 335 598 IPR001245 GO:0004672|GO:0006468
Lal24g0278 664 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 2 633 - -
Lal24g0278 664 Gene3D - 130 237 IPR038408 -
Lal24g0278 664 Gene3D - 19 123 IPR038408 -
Lal24g0278 664 Gene3D Phosphorylase Kinase; domain 1 292 406 - -
Lal24g0278 664 MobiDBLite consensus disorder prediction 615 664 - -
Lal24g0278 664 SUPERFAMILY Protein kinase-like (PK-like) 321 634 IPR011009 -
Lal24g0278 664 Gene3D Transferase(Phosphotransferase) domain 1 407 608 - -
Lal24g0278 664 ProSiteProfiles Protein kinase domain profile. 331 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0278 664 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 633 - -
Lal24g0278 664 ProSiteProfiles Gnk2-homologous domain profile. 130 237 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0278 Lal-Chr24 1992637 1996096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0278 1 664 Receptor kinase-like Gene Family AT4G21410 49.275 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal24g0278 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0278 - - lang:109353867 1099.73