LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal24g0277	ATGCCTTTAAACTCCATCAACCTTATCTTTCCCTTTATCCTTATTATTATTATCTTCTTCCATTTTCCACTAACTGAAGCACAAGTTCCTACTTATCTTTACCACATTTGTTCAACTTCAAACAACGCAACCAATGTTACAAACAGTTCCTTTCAACGCAACCTCCATACCCTCTTCTCTTCTTTATCTTCCAACGCCACTGGGAACACTGAATTCTATAACACCACTGTTACTTCCACAAATCCCTCAGATAAAGTATATGGACTTTTCATGTGTAGGGGTGATGTTTCTTCTTGTACACAGTGTGTTGTTGATGCAAATGAAAAACTATCCTCAGACCCAGAATGTTCTTTGTCCAAACAAGCTGTGATTTGGTACGATGAATGCATGGTTCGATATGATAACACTTCATTCTTCTCTAACGTTTCCATAAGACCCGGGGTTTACTTGTTAAACACGGCTAATATTTCTAACCAGGCAACTTTCATGGATTTATTGTTTGACACCATGAATAAAACTGCAGATGAAGCTTCAAATTCTTCTATTCTTGAAAAGAAGTATGCAACAAACCAAGCAACTATTTCAGGATTTCAGAACCTGTATTGTTTGACTCAGTGCACACCAGATCTTTCACCAAAAGATTGTAGATCATGTCTTGGTGAAGCCATAGAGAGTCTTCCAATATGCTGTGAGGGAAAGCAAGGAGGGAGAGTTTTATTTCCTAGTTGTAACATTAGGTATGAATTGTATCCTTTCTATCAGTCTCCAACATCAGCAGCACCAACACCTACACCAACATCATTAGGACCTGTTCCTTCAACAAATAAATCTAATTCAGGAGGAAGTAGTGGAATCTCATCAGGGACAATTGTTGCAATTGTGGTCCCTATTACAGTGGCTGTGCTGCTATTTATTGTAGGTATTTGTTTCATAAGTAAAAGAGCAGCTAAGAAGAAAGACTCTGCTCAAGAACCAAAAACTGCAAGTGAGATCACCGGTACTGCGGAATCGTTGAGATTTGATTTCAGTACAATCGAAGCGGCCACAAATAAATTTTCTGAAGTTAACAAGCTTGGTGAAGGTGGCTTTGGTGAAGTTTATAAGGGTTTGCTTCCAAGTGGACAAGAAATAGCGGTTAAGCGACTCTCTAAAAGCTCTGGACAAGGTGAGGATGAATTTAAGAATGAAGTAGAGCTTGTTGCTAAGCTTCAGCATAGAAATTTAGCAAGGCTTCTAGGATTTTGCTTGCAAGGAGAAGAAAAGATACTTGTTTATGAATATGTTGTTAACAAAAGCCTTGACTATATTCTTTTTGATCCTGAAAAGCAAAGGATGCTTGATTGGACAAGACGTTATAAGATTATCGCAGGCACTGCTCGAGGCATTCTATATCTTCATGAAGATTCTAGGCTCAAAATTATCCATCGAGACCTTAAAGCAAGCAATATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGTATGGCAAGACTATTTGGAGTAGACCAAACTCAAGGAAATACCAGTAGGATTGTTGGGACATATGGTTATATGTCTCCAGAATACGCAATGCACGGAGAGTTCTCCGTTAAGTCCGATGTATACAGTTTTGGAGTACTCATTTTGGAGATTATAAGTGGCAAGAAAAACAGTTCTTTCTACCAAACAGATGCTGCTGCTGATCTATTAAGCTATGCCTGGAAACTTTGGAAAGATGCAACACCCTTGGAATTGATGGACCACACACTGAAAGAATCCTATACTCGGAATGAAGTTATCCGATGCATCCATATCGGTCTACTTTGTGTCCAAGAAGATCCTGCTGATAGACCTACTATGGCAACAATAGTTCTTATGCTAGATAGCCACACTGTGACTCTACCAGTACCTAATGAGCCTGCATTTTTTCTACACAGTGGAACTGATTCAAACATGCCAAAGGAACTGCCATTTTCTCAATCTGCAGCCATTTCCACACCAGAGTCTGTCAATGATATGTCAATTAGTGAAATGGATCCTCGATAA	2034	0.3889	MPLNSINLIFPFILIIIIFFHFPLTEAQVPTYLYHICSTSNNATNVTNSSFQRNLHTLFSSLSSNATGNTEFYNTTVTSTNPSDKVYGLFMCRGDVSSCTQCVVDANEKLSSDPECSLSKQAVIWYDECMVRYDNTSFFSNVSIRPGVYLLNTANISNQATFMDLLFDTMNKTADEASNSSILEKKYATNQATISGFQNLYCLTQCTPDLSPKDCRSCLGEAIESLPICCEGKQGGRVLFPSCNIRYELYPFYQSPTSAAPTPTPTSLGPVPSTNKSNSGGSSGISSGTIVAIVVPITVAVLLFIVGICFISKRAAKKKDSAQEPKTASEITGTAESLRFDFSTIEAATNKFSEVNKLGEGGFGEVYKGLLPSGQEIAVKRLSKSSGQGEDEFKNEVELVAKLQHRNLARLLGFCLQGEEKILVYEYVVNKSLDYILFDPEKQRMLDWTRRYKIIAGTARGILYLHEDSRLKIIHRDLKASNILLDGDMNPKISDFGMARLFGVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLILEIISGKKNSSFYQTDAAADLLSYAWKLWKDATPLELMDHTLKESYTRNEVIRCIHIGLLCVQEDPADRPTMATIVLMLDSHTVTLPVPNEPAFFLHSGTDSNMPKELPFSQSAAISTPESVNDMSISEMDPR	677

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal24g0277	677	SUPERFAMILY	Protein kinase-like (PK-like)	337	646	IPR011009	-
	Lal24g0277	677	Gene3D	-	29	138	IPR038408	-
	Lal24g0277	677	Gene3D	-	147	252	IPR038408	-
	Lal24g0277	677	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	5	675	-	-
	Lal24g0277	677	CDD	STKc_IRAK	358	624	-	-
	Lal24g0277	677	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	5	675	-	-
	Lal24g0277	677	ProSiteProfiles	Gnk2-homologous domain profile.	144	252	IPR002902	-
	Lal24g0277	677	ProSiteProfiles	Protein kinase domain profile.	352	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal24g0277	677	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Lal24g0277	677	MobiDBLite	consensus disorder prediction	656	677	-	-
	Lal24g0277	677	ProSiteProfiles	Gnk2-homologous domain profile.	31	138	IPR002902	-
	Lal24g0277	677	ProSitePatterns	Protein kinases ATP-binding region signature.	358	380	IPR017441	GO:0005524
	Lal24g0277	677	MobiDBLite	consensus disorder prediction	261	280	-	-
	Lal24g0277	677	Pfam	Salt stress response/antifungal	37	135	IPR002902	-
	Lal24g0277	677	Pfam	Salt stress response/antifungal	155	250	IPR002902	-
	Lal24g0277	677	Gene3D	Transferase(Phosphotransferase) domain 1	429	630	-	-
	Lal24g0277	677	Gene3D	Phosphorylase Kinase; domain 1	311	427	-	-
	Lal24g0277	677	SMART	serkin_6	352	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal24g0277	677	Pfam	Protein tyrosine and serine/threonine kinase	355	621	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal24g0277	Lal-Chr24	1987985	1991200	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal24g0277	14	677	Receptor kinase-like Gene Family	AT4G05200	54.532	0.0	708

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lal24g0277		PK_Tyr_Ser-Thr	1.8e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal24g0277	-		-	lang:109353867	1184.86