Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0276 ATGGGTGTTGTTTGTTTTATGTTGTTTTCATTCTTATGTTGTCTCCTTGTCAGAGCCGAGGAGCCATACCACTGTTACAATGAAATGGGTAACTACACATCCAATAGCACTTACAAAACCAATCTCAACGCTGTATTTTCTACTCTCATTAATTCTCCCAACACAGAAAATAGTTACGGTTTTTTCAACCTCACTTATGGAGAAAATAGTGATAAAGTATACAGCATTGGGTTGTGTAGAGGAGATGTTAAATCAGATGATTGTAGTAGTTGCTTTAACGAATCCAGTGTCTCACTCACAAAGCTTTGTCCAAACCAGAAAGGTGCAATTAGATGGACTAATAATTGCATATTGCGTTACTCTAACCACTCAATATTTGGCATCTTAGATACTGGAACTCAGATTATTTTTTATAATACAGCAGATGCAAGAAATACGAGTCAATTCACCCAAGCTGTAAATAACCTAATGATAAAGCTAATCAACACAGCTGCATCTGGTGATTATCGTAGAAAGTATGCAACGGGAAATTCAAATGAAGTTCCTTTACAAACAATACAAGGTCTTGTGCAGTGTACACCTGATTTGTCTCAATATGATTGTAATTCCTGCTTAAATGATATTTTCTCATATCTCTCAGACTTTTATGGTAAGGTTGGTGGTTTGGTATATACAACCACTTGCATTATTAGATATGAAACTTACAGCTTCTTCGGACCTACGATAGAACTGCCATCATTATCATCGTCACCACCACCATTATCATCGTCACAGCCGCCTCCGGCAACAACTAGCAGCTCTTCCTCCAAAGGAAAGAGTAACATATCTCGAACTATCATCATAGTAGTTGTGTCTATTGTGGTAGTTGTTATTTTTTTGGTGATTATTTGTATCTCTCTCTATTTAAGGCGAAGAAATGCAAGGAAATTTCTTCAAGCTGAAGAGGATGATGATAATGATGACATTGCAATAAGAGAATCATTGCAATTCAACTTTGACACAATAAGAGTTGCTACAAGTGGCTTCTCTAGTTCAAATAAACTAGGACAAGGTGGATTTGGAGCTGTTTACAGGGGTAAGCTTTCTGATGGACAAGAGATAGCAGTAAAAAGATTGTCAAAGGAATCAGGCCAAGGAGATATTGAATTTGAGAATGAAGTAGTTTTAGTGGCTAAACTTCAACACAGAAATTTAGTTAGACTACTTGGTTTCTGCATAGAAGGGAGAGAAAGGCTACTTGTCTATGAATTTGTTCCAAATAAAAGCCTTGATTATTTCATATTTGATCAAATAAAGAAAGAAGAATTGGATTGGGTAAGGCGTTACAAAATTGTCGGTGGTATTGCCCGAGGCCTTCTTTACCTTCATGAGGATTCTCGATTGCGTATCATACATCGTGATCTCAAAGCAAGTAACATACTCTTAGATGAAGATATGAATCCCAAGATATCAGATTTTGGAATGGCAAGACTGTTTGTTGTGGATCAAACACAAGGAAATACAAATAGAATTGTCGGAACATATGGATATATGGCACCAGAATATGTATTGCATGGACAATTTTCAGTGAAATCAGATGTCTTTAGTTTTGGTGTACTGGTCCTTGAGATTGTGAGTGGCCAGAAAAATAGAGGCATTCTTTATGGAGAAGATATGGAGGATCTGCTAAGCTTTATATGGAGAAACTGGAAGGATGGATCAACAAGGAACATTGTAGATCCCACATTAAAGAATGGTTCTTTAGATGAAATCATGAGATGCATCCACATTGGGTTGCTCTGTGTTCAACAAAGTGTAGCTGATAGACCAACCATGGCTTTTGTTATGTTAATGCTTAATACCAATTCTGTGAATCTGCCAGTACCTTCAGAACCTGCTTTTTTTGTTGGTAGCAGAACTGGAAATATTTCATGGGAGTATAAGTCTAGGACAATGAGTTCAATTGAGTCTAATCAATCTAGAAATATATCAGCTCAAAAATCTGTAAATGAAGCTTCCATTACTAAGCCTTATCCTCGTTAG 2022 0.3675 MGVVCFMLFSFLCCLLVRAEEPYHCYNEMGNYTSNSTYKTNLNAVFSTLINSPNTENSYGFFNLTYGENSDKVYSIGLCRGDVKSDDCSSCFNESSVSLTKLCPNQKGAIRWTNNCILRYSNHSIFGILDTGTQIIFYNTADARNTSQFTQAVNNLMIKLINTAASGDYRRKYATGNSNEVPLQTIQGLVQCTPDLSQYDCNSCLNDIFSYLSDFYGKVGGLVYTTTCIIRYETYSFFGPTIELPSLSSSPPPLSSSQPPPATTSSSSSKGKSNISRTIIIVVVSIVVVVIFLVIICISLYLRRRNARKFLQAEEDDDNDDIAIRESLQFNFDTIRVATSGFSSSNKLGQGGFGAVYRGKLSDGQEIAVKRLSKESGQGDIEFENEVVLVAKLQHRNLVRLLGFCIEGRERLLVYEFVPNKSLDYFIFDQIKKEELDWVRRYKIVGGIARGLLYLHEDSRLRIIHRDLKASNILLDEDMNPKISDFGMARLFVVDQTQGNTNRIVGTYGYMAPEYVLHGQFSVKSDVFSFGVLVLEIVSGQKNRGILYGEDMEDLLSFIWRNWKDGSTRNIVDPTLKNGSLDEIMRCIHIGLLCVQQSVADRPTMAFVMLMLNTNSVNLPVPSEPAFFVGSRTGNISWEYKSRTMSSIESNQSRNISAQKSVNEASITKPYPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0276 673 Pfam Salt stress response/antifungal 144 235 IPR002902 -
Lal24g0276 673 Pfam Salt stress response/antifungal 25 122 IPR002902 -
Lal24g0276 673 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 653 - -
Lal24g0276 673 SMART serkin_6 342 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0276 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lal24g0276 673 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Lal24g0276 673 Pfam Protein tyrosine and serine/threonine kinase 345 608 IPR001245 GO:0004672|GO:0006468
Lal24g0276 673 Gene3D - 132 237 IPR038408 -
Lal24g0276 673 Gene3D - 20 124 IPR038408 -
Lal24g0276 673 MobiDBLite consensus disorder prediction 649 666 - -
Lal24g0276 673 CDD STKc_IRAK 348 613 - -
Lal24g0276 673 MobiDBLite consensus disorder prediction 249 272 - -
Lal24g0276 673 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Lal24g0276 673 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 653 - -
Lal24g0276 673 MobiDBLite consensus disorder prediction 649 673 - -
Lal24g0276 673 SUPERFAMILY Protein kinase-like (PK-like) 330 640 IPR011009 -
Lal24g0276 673 ProSiteProfiles Gnk2-homologous domain profile. 131 237 IPR002902 -
Lal24g0276 673 Gene3D Phosphorylase Kinase; domain 1 305 417 - -
Lal24g0276 673 ProSiteProfiles Protein kinase domain profile. 342 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0276 673 ProSiteProfiles Gnk2-homologous domain profile. 20 125 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0276 Lal-Chr24 1982995 1986716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0276 11 647 Receptor kinase-like Gene Family AT4G21410 47.904 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal24g0276 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0276 - - gmx:100784223 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0365 12 2607092 2611438 Lal24g0276 24 1982995 1986716 LSH