Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0275 ATGCACAGCAACGATAACATACCTATTCACCATGTACCAGGTCCGAACCCTAAACCTCTTCAGCGCCACCGCACCACCCGCTACTACATGCAACGTGTCCAAGATAGCCTCACCACTCAAGTTTCCAAGATCATCTGCACTATCTTCTTGGGCCTTCTCTTCATCGCGGGCCTCATTCTCTTCATCCTCTGGCTCAGTCTCCGTCCCCACAGGCCCAGGTTCTTCATTCACGATTTCTCTATCCCGGGCTTAGCCCAACAATCTGGGTTTCAAAATGCCCAAATAACTTTCAGTGTAACCGCCAGAAACTCCAACCAGAAAGTAGGGATTTATTATGAATCAATGGCCGGGTCGGAGCCTAAGAATACGACGGAGGTTGACGGTGTTCTGAGTGGGGCGACGTTAACCGTTAATAGCGAGCGTTGGGGTGAGTTCCAGGGAGAAAGGGCGCATGGGAGTGTGGTGTTCCGATTGGAATTGACGTCTGTGATTGAATTCCATATACACACGTGGGGTAGCAAGCGCCACACGATGCATGCAAATTGTGATGTAGGAGTGGGACCTGATGGGTACATCTTGCTTCACACATATATTACCCTTCATTACCTTTCTATCACTGTTCAAGCAACAAACCTTAAAACTCTTCTATCATGGCTTTCCTCTAATGCCACAAACACAATCCAAATTCACAACACCACTGTTGCAGAAAGCAACACACCTTCCAACACCATCTATGGCCTTTTCATGTGCAGAATTGGAGATGGTGTCCCTGATTGTAAAGATTGTGTTATAAACTCAACCAAGGTCATAACAAAACTATGCCCCATGTCTAAAGAAGCTATAATGTGGAGTGATAATTGCTTCATGCGTTACTCAGATCATTATTTCTTTACAACAGTGGAAGAGAGTCCTAAACACAGTGCCATGAATGAGAATGACTATGTAGGACAAGCAGAACATTTCAATAGCAAACTTTGGGATACCTTGAATGCTGTGAGAAATCTTACAGCAACTCCTTCTTTTGGAACTATGAAGTATGGCTACAAGTCAGTGAATATCACTCCTAACCAAACTCTATATGCAATGGGATATTGCATTCCATACCTTTCCTCAGAAAACTGTAGTTGGTGTCTCAGTGATGCCATAGCAGAAATTCCAACATCTTGTTGTAGAGGAAAAACTGGAGGAAGAGTTATTTACCCAAGCTGTGGTGTTAGATTTGAATCATATCTATTTTATCATCCACTTTCTTCAGGGTCACTAACTCCTACTACTACAGTGGTTCCTCTTCCCTCTTTGCCATTCTCAGGTATCAATGTTCTTGTAGGAAAAAGAAAACATTCTGTAACGATAATCGCTGTGGTTGTACCAATTGTTTTATTGGTGGTCGTTTTATGTTTGGCTTGCAGCCGGTTTCTCAACAAAAGACAGAGGAAGAGTCATGAGGCTATTCTCAAAGAAAGCTTTGGAAATGAAGTAACAACTTTGGAGTCCTTGTGGTTTGATTTAAGTGAAATACAGTCTGCAACAAACAAGTTTGCTAAAGAAAATATGATTGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGTGTTCTTTCCAATGGGAAGGAGATAGCTATGAAGAGGCTTTTGGGAAACTCTCAGCAAGGGGCAACAGAATTTAAGAATGAGGTTCTTGTCATAGCTCAACTTCAACACAGAAATCTAGTGAAGTTACAAGGATTTTGTCTGGATGGACAAGAAAAGATGCTAGTATATGAATATGTACCCAACAAGAGCCTTGATTATTTTTTATTTGATCCCCCAAAGAGAAGGGAATTAAATTGGTGTTACAGGTACAATATTATTGGAGGAATTGCTCGAGGAATTCTTTATTTGCATGAGGATTCTCGTCTTAAAATTATACACCGTGATCTCAAACCTAGTAATATTTTGCTAGACGGTAACATGAATCCAAAAATCTCAGACTTTGGAATGGCAAGAATTGTTGCTGCTGATAATATTGAAGAAAACACACATAGAATTGTTGGAACATACGGTTACATGTCTCCAGAGTATGCAATGCATGGCCAATTTTCCGTGAAGTCTGATGTGTTTAGTTTTGGTGTCATGTTGCTAGAGATTATCAGTGGAAAAAGGAAAGGTTTTTCTTCTGAATCAGATCATGTAAATGACATAAGGAGATATGTGAGTATTTAA 2199 0.4093 MHSNDNIPIHHVPGPNPKPLQRHRTTRYYMQRVQDSLTTQVSKIICTIFLGLLFIAGLILFILWLSLRPHRPRFFIHDFSIPGLAQQSGFQNAQITFSVTARNSNQKVGIYYESMAGSEPKNTTEVDGVLSGATLTVNSERWGEFQGERAHGSVVFRLELTSVIEFHIHTWGSKRHTMHANCDVGVGPDGYILLHTYITLHYLSITVQATNLKTLLSWLSSNATNTIQIHNTTVAESNTPSNTIYGLFMCRIGDGVPDCKDCVINSTKVITKLCPMSKEAIMWSDNCFMRYSDHYFFTTVEESPKHSAMNENDYVGQAEHFNSKLWDTLNAVRNLTATPSFGTMKYGYKSVNITPNQTLYAMGYCIPYLSSENCSWCLSDAIAEIPTSCCRGKTGGRVIYPSCGVRFESYLFYHPLSSGSLTPTTTVVPLPSLPFSGINVLVGKRKHSVTIIAVVVPIVLLVVVLCLACSRFLNKRQRKSHEAILKESFGNEVTTLESLWFDLSEIQSATNKFAKENMIGKGGFGEVYKGVLSNGKEIAMKRLLGNSQQGATEFKNEVLVIAQLQHRNLVKLQGFCLDGQEKMLVYEYVPNKSLDYFLFDPPKRRELNWCYRYNIIGGIARGILYLHEDSRLKIIHRDLKPSNILLDGNMNPKISDFGMARIVAADNIEENTHRIVGTYGYMSPEYAMHGQFSVKSDVFSFGVMLLEIISGKRKGFSSESDHVNDIRRYVSI 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0275 732 Gene3D Phosphorylase Kinase; domain 1 472 588 - -
Lal24g0275 732 SUPERFAMILY Protein kinase-like (PK-like) 493 714 IPR011009 -
Lal24g0275 732 ProSiteProfiles Gnk2-homologous domain profile. 302 412 IPR002902 -
Lal24g0275 732 SMART serkin_6 513 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0275 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lal24g0275 732 MobiDBLite consensus disorder prediction 1 22 - -
Lal24g0275 732 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 209 729 - -
Lal24g0275 732 Pfam Protein kinase domain 514 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0275 732 ProSiteProfiles Gnk2-homologous domain profile. 190 296 IPR002902 -
Lal24g0275 732 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Lal24g0275 732 Gene3D Transferase(Phosphotransferase) domain 1 589 731 - -
Lal24g0275 732 Gene3D - 305 412 IPR038408 -
Lal24g0275 732 Gene3D - 192 296 IPR038408 -
Lal24g0275 732 Pfam Salt stress response/antifungal 210 293 IPR002902 -
Lal24g0275 732 Pfam Salt stress response/antifungal 313 410 IPR002902 -
Lal24g0275 732 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 209 729 - -
Lal24g0275 732 ProSiteProfiles Protein kinase domain profile. 513 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0275 Lal-Chr24 1977158 1980806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0275 210 730 Receptor kinase-like Gene Family AT4G05200 46.704 1.61e-151 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal24g0275 Pkinase 5.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0275 - - gmx:100793219 620.928