Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0256 GTGTTGAGGCGCGTTGCTTACCTGGTAGAAACAACATCCCTAATTCTAAAAACCAATGAAACAAATCGACCTGTCCCTGCACATGCTTCTCCTCCTGGCAACTTTGTCCGCCTGGAGAATCGAACTTACAGCAAAGACGATTTACATTTGAATAAAAAGACAAGGATGCGTAGGTGGCTTTGCTGTAATTGTCAGGTGGAAGAGTCTTACTCATCGAATGAAAATGAGCACCAGAAAAGCCCGAGGCATTATGGAGATGGCAACCACAAGGGCTTAAAGGCATCAGCTCCTACGAAACCTGAAACACAAAAGGCACCACCACCTATTGAAGTTCCAGCCTTATCTTTAGATGAGCTGAAGGAAAAGACTGACAACTTCGGATCAAAGGCATTGATTGGTGAAGGATCATATGGAAGGGCGTATTATGCAACCTTGAACAATGGAAAAGCCGTGGCTGTGAAAAAGCTTGATGTTTCCATGGTCTCAAGATTGAAAAATGACAATTTTCTTGAGTTGCATGGTTATTGTGTTGAAGGGAATCTTCGTGTACTAGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCACAACCAGGTCCAACCCTTGATTGGATACAACGAGTTAGAATTGCAGTTGATGCAGCAAGGGGGCTAGAATATTTACATGAGAAAGTTCAGCCAGCTGTTATTCACAGAGATATCAGATCAAGTAATGTGCTTATCTTTGAAGATTTCAAGGCTAAGATAGCGGATTTTAACCTTTCAAATCAGTCTCCTGACATGGCTGCACGCCTTCATTCCACCCGAGTGCTGGGAACTTTTGGGTACCATGCTCCAGAATATGCAATGACTGGCCAGTTGACTCAGAAGAGCGATGTCTACAGTTTTGGTGTTGTTATTCTTGAGCTTCTTACAGGAAGAAAACCTGTTGATCATACTATGCCTCGCGGACAGCAAAGTCTTGTCACATGGGCTACCCCAAGATTAAGTGAGGATAAAGTTAAACAATGTGTTGACCCAAAATTGAAGGGAGAATATCCCCCTAAAGGAGTTGCCAAGCTGGCAGCTGTTGCAGCATTGTGTGTGCAGTATGAAGCAGAGTTTAGACCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGACTTCTGCTCCTGCTGCCCCCGAGAGTTGA 1215 0.4379 VLRRVAYLVETTSLILKTNETNRPVPAHASPPGNFVRLENRTYSKDDLHLNKKTRMRRWLCCNCQVEESYSSNENEHQKSPRHYGDGNHKGLKASAPTKPETQKAPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRAYYATLNNGKAVAVKKLDVSMVSRLKNDNFLELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPAVIHRDIRSSNVLIFEDFKAKIADFNLSNQSPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVILELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTSAPAAPES 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0256 404 SUPERFAMILY Protein kinase-like (PK-like) 105 390 IPR011009 -
Lal24g0256 404 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 41 401 - -
Lal24g0256 404 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 41 401 - -
Lal24g0256 404 ProSitePatterns Tyrosine protein kinases specific active-site signature. 240 252 IPR008266 GO:0004672|GO:0006468
Lal24g0256 404 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Lal24g0256 404 SMART tyrkin_6 126 390 IPR020635 GO:0004713|GO:0006468
Lal24g0256 404 Gene3D Phosphorylase Kinase; domain 1 93 188 - -
Lal24g0256 404 Gene3D Transferase(Phosphotransferase) domain 1 190 401 - -
Lal24g0256 404 MobiDBLite consensus disorder prediction 72 89 - -
Lal24g0256 404 Pfam Protein tyrosine and serine/threonine kinase 131 390 IPR001245 GO:0004672|GO:0006468
Lal24g0256 404 ProSiteProfiles Protein kinase domain profile. 126 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0256 404 MobiDBLite consensus disorder prediction 70 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0256 Lal-Chr24 1818916 1824251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0256 99 404 Receptor kinase-like Gene Family AT3G58690 45.342 1.72e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lal24g0256 PK_Tyr_Ser-Thr 8.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0256 K13436 - mnt:21407434 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0256 24 1818916 1824251 Lal24g0256 24 1818916 1824251 ECH
Lal12g0332 12 2372603 2376301 Lal24g0256 24 1818916 1824251 LSH