Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0235 ATGGCGGTTTATAGAATTGCAATTGGGTCTCCAAGAGAAGCTAGCCATCCTGCTGCAATTAGAGCAGCATTTGCAGAGTTCTTTTCTATGCTCATTTTTGTTTTTGCTGGCCAAGGCTCTGGAATGGCTTATAGCAAACTAACCAACAATGGGCCTGCAACTCCTGAGGGTCTCATAGTTGCATCATTATCTCATGCATTTGGGCTATTTGTGGCAGTTTCTGTTGGGGCAAACATTTCTGGTGGCCATGTGAACCCTGCAGTCACATTTGGTGCATTTGTAGGAGGAAACATAACACTATTGAGAAGTATTTTGTATTGGATTGCACAGTTGTTTGGTTCAGTTGTTGCTTGCATTCTTCTCAATTTTGCCACTGGTGGAATGAGTCAGAATCCAACTTCTTTTAGTTATGGGTCAAAGGTGATCATTCGCCTGGTTCGACAGACTTATGTGGATGGGGCATGTTGGGAAGAAACATCAGCTTTCTCTCTATCATCTGGTGTGTCAGTATGGAATGCACTTGTTTTTGAAATTGTGATGACTTTTGGGTTAGTATATACAGTTTATGCTACAGCAGTAGATCCAAAAAAGGGTAATGTAGGTGTTGTTGCACCAATAGCAATTGGTTTTATTGTAGGTGCTAACATTTTGGTTGGTGGTGCTTTTGATGGAGCATCTATGAACCCAGCAGTGTCATTTGGTCCTGCATTGGTTAGTTGGTCATGGACTCATCATTGGGTTTATTGGCTTGGCCCATTCATTGGTTCAGCAGCTGCAGCTATTATTTATGATAATATCTTTATTGGTGATGATTCTCATCAACCCCTTTCAAATACTGATTTCTAG 846 0.4125 MAVYRIAIGSPREASHPAAIRAAFAEFFSMLIFVFAGQGSGMAYSKLTNNGPATPEGLIVASLSHAFGLFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRSILYWIAQLFGSVVACILLNFATGGMSQNPTSFSYGSKVIIRLVRQTYVDGACWEETSAFSLSSGVSVWNALVFEIVMTFGLVYTVYATAVDPKKGNVGVVAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWTHHWVYWLGPFIGSAAAAIIYDNIFIGDDSHQPLSNTDF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0235 281 SUPERFAMILY Aquaporin-like 13 271 IPR023271 -
Lal24g0235 281 Pfam Major intrinsic protein 14 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 PANTHER AQUAPORIN TIP1-1 157 280 - -
Lal24g0235 281 PANTHER AQUAPORIN TIP1-1 1 141 - -
Lal24g0235 281 Gene3D Glycerol uptake facilitator protein. 4 281 IPR023271 -
Lal24g0235 281 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 PRINTS Major intrinsic protein family signature 246 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Lal24g0235 281 CDD MIP 21 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0235 281 PANTHER AQUAPORIN-8 1 141 IPR034294 -
Lal24g0235 281 PANTHER AQUAPORIN-8 157 280 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0235 Lal-Chr24 1697202 1698659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0235 1 281 Major Intrinsic Protein MIP AT4G01470 71.886 4.53e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0235 K09873 - gmx:100818197 452.595