LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal24g0223	ATGGCTGCAAATTCTGGCTTCAAACTGAATCATTTATTGATATTTGCATGTCTTATTGGGATAGCTTCTGCTCAATTATCAACTAAGTTCTATGATAAAACGTGTCCAAAAGCTGTTAAAATAATTACTAAAGCAGTGGATGATGCCGTGTCCAATGAGACTAGAATGGGTGCATCCTTGCTAAGACTCCATTTTCATGATTGCTTTGTTCAGGCAAGTTTCATTTCATTCACCATCTTAGGATGTGATGCATCAGTATTGTTAGATGACACAGAAAATTTCACAGGTGAGAAGAATTCTTTCCCAAATGCCAACTCCTTGAGGGGTTTTGAAGTCATAGACAACATAAAATCTCAATTGGAGAAGTCATGCCCTGGTGTTGTTTCTTGTGCTGACATCTTAGCCATTGCTGCAAGTGAATCTGTTGGTGCTCTTGGTGGACTAAGATGGAATGTAGCATTAGGCAGAAGAGACTCAATCACTGCAAGTTTAAGTGAATCTAATTCAGACTTGCCTGCACCATTTTTGGATCTTAGTGGCCTTATCACTGCTTTTTCCAATAAAGGTTTCACAACTGAAGAAATGGTTACTTTATCAGGAGCTCACACAATAGGCCAAGTGAAGTGTAGATTTTTCAGAGATAGGATTTATAATGAGACCAACATAGATATATCTTATGCAAAAGCAATGCAAGCAGCATGTCCCTTTGAAAGTGGTGATGAAAATTTGTCACCTTTTGATTCAAAAACTGCAGCCACATTTGACAATGCATACTACCAAAACTTGGTGAAGTTAAAGGGTCTTGTACATTCAGACCAACAACTATTTGTGAATGGATCAGGAGAAACAGATAGTCAAGTAAGTAGATATAGCAGAAACATGGGTCGTTTTAAGAAAGATTTTTCAGATGCAATGTTAAAAATGAGCATTCTTAATCCATTAACTGGCTCTGATGGTCAGATTAGGACTAATTGTCATTTCATCAATGCATAA	993	0.3726	MAANSGFKLNHLLIFACLIGIASAQLSTKFYDKTCPKAVKIITKAVDDAVSNETRMGASLLRLHFHDCFVQASFISFTILGCDASVLLDDTENFTGEKNSFPNANSLRGFEVIDNIKSQLEKSCPGVVSCADILAIAASESVGALGGLRWNVALGRRDSITASLSESNSDLPAPFLDLSGLITAFSNKGFTTEEMVTLSGAHTIGQVKCRFFRDRIYNETNIDISYAKAMQAACPFESGDENLSPFDSKTAATFDNAYYQNLVKLKGLVHSDQQLFVNGSGETDSQVSRYSRNMGRFKKDFSDAMLKMSILNPLTGSDGQIRTNCHFINA	330

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal24g0223	330	PANTHER	PEROXIDASE	6	329	-	-
	Lal24g0223	330	PRINTS	Haem peroxidase superfamily signature	57	71	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lal24g0223	330	PRINTS	Haem peroxidase superfamily signature	146	158	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lal24g0223	330	PRINTS	Haem peroxidase superfamily signature	194	209	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lal24g0223	330	PRINTS	Haem peroxidase superfamily signature	247	262	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lal24g0223	330	SUPERFAMILY	Heme-dependent peroxidases	25	329	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Lal24g0223	330	ProSitePatterns	Peroxidases proximal heme-ligand signature.	194	204	IPR019793	-
	Lal24g0223	330	ProSiteProfiles	Plant heme peroxidase family profile.	25	329	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lal24g0223	330	CDD	secretory_peroxidase	25	328	IPR033905	GO:0004601\|GO:0042744
	Lal24g0223	330	Gene3D	-	29	325	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal24g0223	Lal-Chr24	1628527	1629946	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal24g0223	21	329	Peroxidase	AT5G05340	57.235	1.37e-121	351

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal24g0223	K00430		-	gmx:100802244	470.314

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