Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0219 ATGTCTTCGCGAATTGTATTACCGTATTTTGATCATATGGAAGTCAACGATGTTAATGGTGGGGCTCGTTCGAGTGAATCTTTGACACTGGGGCAACTTCTCAAGCATGTTGGAGATGTGCAGAAGGAAGCCTCCGGTGACGGTAGTGAGACTCCTGTGCACCACACACTTGAAATATCCGATGGTGGTGTTGGAACTGAGCATCGTGCAGTTCCGTTTGTCCTTTCATTTAGTAATCTCACCTATAGCGTCAAGATTCCGTGGAAATTCAACTTCTCTGAAATCTTTTCCCAACGCCGGCAACACCATGGTGCAGCGGCGGTGGCGGTGGAGCCAACAGTTGGAGAGAGCATTTTCACACGGAGCAAGACTCTGTTGAACGATATCTCCGGCGAAACACGTGATGGTGAGATAATGGCGGTTCTCGGAGCAAGCGGTTCTGGAAAGTCTACACTGATCGACGCGCTGGCGAACCGAATCGCCAAAGGAAAATTGAAAGGAACCGTTGCGCTGAACGGTGAAGCCTTGGAATCGCGTCTTCTGAAGGTGATCTCTGCGTACGTGATGCAAGACGATCTCCTCTTTCCAATGCTCACCGTCGAAGAGACTCTAACCTTCGCCGCCGAATTCCGGTTACCACGCAGTCTCTCAAAATCGAAGAAAAAGGCACGCGTCCAAGCCCTAATCGACCAGCTAGGACTCCGAAACGCCGCGAAAACGATCATCGGAGACGAAGGCCACCGCGGAGTCTCCGGCGGTGAACGGCGAAGAGTCTCAATCGGAATCGACATAATTCACGACCCGATCCTCCTTTTCTTAGACGAACCAACCTCAGGACTTGACTCCACAAGCGCGTTCATGGTGGTGAAGGTTCTCCAAAGAATCGCACAAAGTGGAAGCATTGTAATCATGTCAATTCACCAACCTAGTTACAGAATCCTAGGTCTCCTTGATCGCATGATCTTCTTATCTCGCGGCCAAACCGTTTACAGCGGTTCTCCGTCACAGTTACCGTCGTTCTTCGCCGAGTTCGGTCACCCAATACCAGAAACCGATAACAGAACCGAGTTCGCATTAGACCTAATTCGCGATCTAGAAGGTTCCCCTGGTGGAACAAAAACCTTAGTGGAGTTCAACAAATCATGGCAGAGCATGAAAAAATCACAACACCAACCACTTAACACTACAAATGTTGCTCCTGAACAAAACAACATGTCGTTGAAGGAAGCTATAAGTGCAAGTATTTCAAGAGGGAAACTAGTTTCTGGTGCAACCAACGCTAAAACGAACCCATCATCTATGGTGCCAGCATTTGCAAACCCATTTTGGATTGAAATGGGAACACTTTCAAAACGTTCATTCTTAAACTCAAGAAGAATGCCAGAGTTATTTGGAATGAGATTAGGTACAGTGATGGTAACTGGGTTCATTCTTGCAACCATGTTTTGGCAACTTGATAATTCACCTAAAGGGGTTCAAGAAAGGCTTGGTTTTTTCGCTTTTGCTATGTCCACCACTTATTACACCACCGCTGATGCACTCCCTGTGTTCCTTCAGGAACGTTACATTTTCATGAGAGAAACTGCATACAATGCTTATAGAAGATCCTCATACCTTGTCTCACATGCTCTTGTTGCATTGCCTGCATTAGTGTTCCTATCTTTGGCTTTTGCTGCAATAACTTTTTGGGCTGTGGGTCTTGATGGTGGGTTTTTGTTTTACTTTCTGGTTATACTAGCTTCATTTTGGGCTGGGAACTCATTTGTGACGTTTCTTTCTGGTGTGGTGCCTCATGTGATGCTTGGTTACACTATAGTTGTTGCTATACTTGCATACTTTTTGTTATTCAGTGGGTTCTTCATTAACAGGGATAGGATTCCAAGTTATTGGATTTGGTTCCACTACATGTCTTTGGTGAAGTATCCATATGAAGCTGTTCTTCAGAATGAGTTTGGTGATCCTATCAAGTGTTTTGTAAAAGGGGTGCAGATTTTTGATAATACTCCACTTAAGTTAGTGCCTAATGCAATGAAGTTGAAGCTATTGGAGAGTATGAGTAACACATTGGGAATGAGAATTACAAGCTCCACATGCTTGACAACAGGTTCTGATGTATTGCAGCAGAATGGTGTGACTGAATTGGGAAAGTGGAATTGTTTGTGGGTCACAGTGGCTTGGGGTTTCTTTTTCAGGATTCTATTCTACTTGTGCTTGTTGGTGGGAAGCAAGAACAAGAGGAAGTGA 2244 0.4523 MSSRIVLPYFDHMEVNDVNGGARSSESLTLGQLLKHVGDVQKEASGDGSETPVHHTLEISDGGVGTEHRAVPFVLSFSNLTYSVKIPWKFNFSEIFSQRRQHHGAAAVAVEPTVGESIFTRSKTLLNDISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGKLKGTVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRSLSKSKKKARVQALIDQLGLRNAAKTIIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPSFFAEFGHPIPETDNRTEFALDLIRDLEGSPGGTKTLVEFNKSWQSMKKSQHQPLNTTNVAPEQNNMSLKEAISASISRGKLVSGATNAKTNPSSMVPAFANPFWIEMGTLSKRSFLNSRRMPELFGMRLGTVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTYYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVALPALVFLSLAFAAITFWAVGLDGGFLFYFLVILASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYMSLVKYPYEAVLQNEFGDPIKCFVKGVQIFDNTPLKLVPNAMKLKLLESMSNTLGMRITSSTCLTTGSDVLQQNGVTELGKWNCLWVTVAWGFFFRILFYLCLLVGSKNKRK 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0219 747 Gene3D - 116 341 IPR027417 -
Lal24g0219 747 Pfam ABC-2 type transporter 307 383 IPR043926 GO:0140359
Lal24g0219 747 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 108 350 IPR003439 GO:0005524
Lal24g0219 747 SMART AAA_5 135 327 IPR003593 -
Lal24g0219 747 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 25 742 - -
Lal24g0219 747 Pfam ABC transporter 126 278 IPR003439 GO:0005524
Lal24g0219 747 Pfam ABC-2 type transporter 447 651 IPR013525 GO:0016020|GO:0140359
Lal24g0219 747 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 742 - -
Lal24g0219 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 341 IPR027417 -
Lal24g0219 747 ProSitePatterns ABC transporters family signature. 250 264 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0219 Lal-Chr24 1614287 1616530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0219 125 337 Calmodulin-binding Proteins AT2G36910 28.182 4.86e-11 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0219 24 1614287 1616530 Lal24g0219 24 1614287 1616530 ECH