Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0177 ATGACTGAAAGTCGTGAAGTCAACGTCAATGAATCTAAGAAGGTCGTTCCACTAAATACTTGGGTTCTTATTTCCAATTTCAAACTTGCTTACAATCTACTAAGGCGTGCTGATGGAACATTCAATAGAGACTTAGCAGAGTTCCTAGACAGAAAGGTCCCAGCTAACACAATTCCTGTTGATGGGGTATTCTCCTTTGACCATGTTGATAGTAACATAGGCTTATTCAATCGTGTGTATCAACCCGCTCCCAAGAAAGAATCCCGGTGGGGCATCATAGAGTTGGAGAAGCCCTTAAGCACCACAGAGATTGTGCCTGTAATAATTTTCTTCCATGGTGGAAGCTTCTCCCATTCATCTGCCAATAGTGCTATCTATGACACTTTCTGCCGCCGCCTCGTGAGCATATGCAAGGCTGTTGTGGTGTCGGTGAATTACCGGAGGTCACCCGAGCATAGATATCCGTGTGCATATGATGATGGATGGGCTGCACTTAAGTGGGTTAAGTCAAGAACATGGCTTCAAAGTGGAAAGGATTCTAAGGTTTATGTGTACATGGCTGGTGATAGTTCCGGTGGTAATATTGCACATCATGTGGCAGTGAGGGCTGCCGAGGAAGATGTTGAGTTACTAGGAAGCATTCTTCTTCATCCATTGTTTGGTGGAGAGAAGAGAACTGAGTCAGAGAAGAAACTTGATGGGAAGTACTTTGTGAGGTTGCAAGATCGCGATTGGTATTGGAGAGCTTTTCTACCTGAAGGGGAAGATAGAGATCATCCTGCATGTAATCCATTTGGCCCTAGAGGTAGAAGCCTTGCAGGAATCAAGTTTCCTAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTGTCCAAGATTGGCAATTGAAGTATGTTGAAGGACTCAAAAATTCCGGCCACGAGGTCAAGCTTCTAAATCTAAAGGAGGCAACCATTGGTTTCTACTTCTTGCCCAATAATGATCATTTCTATATCCTCATGGAGGAGATAAAGAACTTCGTCAATTCTAACTACTAA 1035 0.4348 MTESREVNVNESKKVVPLNTWVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANTIPVDGVFSFDHVDSNIGLFNRVYQPAPKKESRWGIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEEDVELLGSILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGRSLAGIKFPKSLVCVAGLDLVQDWQLKYVEGLKNSGHEVKLLNLKEATIGFYFLPNNDHFYILMEEIKNFVNSNY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0177 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Lal24g0177 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Lal24g0177 344 PANTHER ARYLACETAMIDE DEACETYLASE 3 341 - -
Lal24g0177 344 PANTHER GIBBERELLIN RECEPTOR GID1B 3 341 - -
Lal24g0177 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Lal24g0177 344 SUPERFAMILY alpha/beta-Hydrolases 59 341 IPR029058 -
Lal24g0177 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0177 Lal-Chr24 1296482 1299060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0177 1 342 Carbohydrate Esterase AT3G63010 77.843 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0177 K14493 - cit:102618248 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0177 24 1296482 1299060 Lal24g0177 24 1296482 1299060 ECH
Lal12g0234 12 1652320 1654831 Lal24g0177 24 1296482 1299060 LSH
Lal13g0201 13 1268414 1270948 Lal24g0177 24 1296482 1299060 LSH