Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0175 ATGAAGGAAAAAGTAGAGTCTCCTGTGACAGTTCTTGAGGACTATTTTAGGAGTTCAGATTCAGAAACAAGTTCTTCTAAGGATCCAACAGTGGATTCTGAGTCTCAATACATTTCACAACCTGCTTGTAAATGGCATAAATTTTTTCAATTGTTGAGGAGCAGATCAAAGAAACATGTACCTAAATTGCATTCTCTCAGTGGCCTCAAGTTCTCAAAAAGAATGAGCAGAAGCATGAGAGAGAGAATATTGCCTAGTTGTCTCATTGATGCAACTTTATCATCCCCCTCCAGGTCACAATGGAAGATCTTTACAAATCATGATATACTGCTTGCAACCAATTATTTCAGCCAAGAAAATTTGATTGGAAAAGGTGGTTATGCAGAAGTTTACAAAGGGTGTTTACCAAATAATCAGCTAGTAGCAATTAAAAGGTTAACAAGAGGAACAGCTGATGAAATCATAGGTGATTTCTTATCAGAACTTGGTGTAATGGCACATGTTAAGCATCCTAATACTGCTAAGCTAGTTGGTTATGGTGTGGATGGTGGAATGCATCTAGTTCTTCAATTGTCTGAAAAAGGAAGTCTGGCTTCAGTGCTCTATGGTTCCAAGGAGAAACTACCATGGTTTATTAGGCAAAAAATTGCATTAGGAACAGCTAAGGGGATATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATCCACAGAGATATTAAAGCTGCAAACATATTGCTCACAGAGGACTATGAGCCTCAGATATGTGATTTTGGGCTAGCAAAATGGCTACCAGAGAATTGGACTCACCACACAGTTTCAAAATTTGAAGGAACTTTTGGCTTAGCTTCCATTTATGACTGCCACAGTTACCTTGCACCTGAATACTTACTTCATGGCATAGTAGATGAGAAAACGGATGTATTTGCCTTTGGTGTACTACTATTAGAATTAGTCAGTGGACGAAGAGCACTTGATTATTCAAAACAAAGTCTTGTTTTATGGGTTGAGCAGCTTTTGAATGGAAACCTTAGTTGCTTCAAGGGTATGAAGAAATCTAGACTACCATTTTTCAGAAAAGTATTTCAGGAAGAACTCATTGATTGTGAATAG 1113 0.3756 MKEKVESPVTVLEDYFRSSDSETSSSKDPTVDSESQYISQPACKWHKFFQLLRSRSKKHVPKLHSLSGLKFSKRMSRSMRERILPSCLIDATLSSPSRSQWKIFTNHDILLATNYFSQENLIGKGGYAEVYKGCLPNNQLVAIKRLTRGTADEIIGDFLSELGVMAHVKHPNTAKLVGYGVDGGMHLVLQLSEKGSLASVLYGSKEKLPWFIRQKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPENWTHHTVSKFEGTFGLASIYDCHSYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSKQSLVLWVEQLLNGNLSCFKGMKKSRLPFFRKVFQEELIDCE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0175 370 ProSiteProfiles Protein kinase domain profile. 116 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0175 370 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 340 - -
Lal24g0175 370 Gene3D Phosphorylase Kinase; domain 1 90 190 - -
Lal24g0175 370 Pfam Protein kinase domain 117 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0175 370 PANTHER OS08G0249100 PROTEIN 1 340 - -
Lal24g0175 370 SUPERFAMILY Protein kinase-like (PK-like) 101 343 IPR011009 -
Lal24g0175 370 MobiDBLite consensus disorder prediction 14 33 - -
Lal24g0175 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Lal24g0175 370 MobiDBLite consensus disorder prediction 1 33 - -
Lal24g0175 370 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Lal24g0175 370 SMART serkin_6 116 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0175 370 Gene3D Transferase(Phosphotransferase) domain 1 193 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0175 Lal-Chr24 1280119 1283480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0175 103 341 Trihelix Transcription Factor Family AT1G68690 41.057 2.50e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal24g0175 Pkinase 3.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0175 - - lang:109353423 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0175 24 1280119 1283480 Lal13g0669 13 4338713 4345975 ECH
Lal24g0175 24 1280119 1283480 Lal24g0175 24 1280119 1283480 ECH
Lal14g1956 14 18684129 18687648 Lal24g0175 24 1280119 1283480 ECH