Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0162 ATGGTTGATGAAATTAGATCTTTTTTCAATCCCAAAGGGGGCTGCTATTCAAGAGGGATTAGAAAAGCTATTGGTGTTCCCGAATTTGATGAATTTTTAAGGAGGGAAGCATTTCTTGATGAAGAAACTAAACAAAGGTTACTTGAAGAAGCAATTAATGAAATGAAGGTGAACACTTGCAAATTGGCTATGAAACAATTGGGGAGGATTCGTAGGCTCAGAAATGTGAAGAGATGGAAGATTCATCGATTAGATGCCACATCTGTGTTTAGAAAGAATGGTCAAGAAGCAAATGAGGCATGGAAAAAGTTGGTGCCAGAGCCTAGTGCTATGATTGTTGCCAACTTTCTTTACAACTCAAACACTACTACTACTACTACAAATGGTTTTTCTGGCCTTAGAATCTCACCTTCCCAGAGTGTTATTGCTAGAGCAACATGCTAG 444 0.3851 MVDEIRSFFNPKGGCYSRGIRKAIGVPEFDEFLRREAFLDEETKQRLLEEAINEMKVNTCKLAMKQLGRIRRLRNVKRWKIHRLDATSVFRKNGQEANEAWKKLVPEPSAMIVANFLYNSNTTTTTTNGFSGLRISPSQSVIARATC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0162 147 PANTHER TRNA DIMETHYLALLYLTRANSFERASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 128 - -
Lal24g0162 147 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 128 IPR039657 -
Lal24g0162 147 Gene3D - 1 139 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0162 Lal-Chr24 1179410 1179853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0162 1 117 C2H2 Transcription Factor Family AT2G27760 29.861 7.45e-13 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0162 24 1179410 1179853 Lal24g0162 24 1179410 1179853 ECH