Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0159 ATGGCTGCTACAGCACTAGGTAGTAGTAGTAGCCTTCAAATCATGTTGCAGGCTGCGGTGCAATCTGTTCAGTGGACTTATAGCCTCTTCTGGCAACTTTGTCCACAACGAGCGATTCTGGTATGGGGAGATGGGTACTATAACGGGGCAATAAAGACAAGGAAAACAGTGCAACCAATGGAGGTTAGTGCGGAGGAGGCAACTCTTCAAAGAAGCCAACAACTTAGAGAACTCTATGAAACTTTATCTGCCGGAGAGACAAACCAACCTACTCGCCGCCCTTGTGCTGCTTTGTCACCAGAAGACTTAACTGAATCTGAGTGGTTCTATTTGATGTGTGTCTCTTTCTCCTTTCCCCCTGGTGTCGGGTTGCCGGGAAAGGCTTATGCCAGGAGGCAGCATTTATGGCTTGCTTGTGCAGATGAGGTTGACAGCAAAACATTTTCAAGAGCTATTCTAGCCAAGAGCGCTCATATACAGACAGTGGTGTGCATTCCTCTATCAGACGGCGTCGTTGAGTTGGGTACAACGGATAAGGTTCAAGAAGACATTAATTTCGTTCAACACATCAATACCTTCTTCACAGACATCCCTCACTTCCACCACCATCACCACCATCCTCCGCCGCCAAATCCTGCCCTATCAGAGCACTCAACCTCCAATCCCACTTCCTCATCCGCTGCAGATATACCAGCCACCAATGTTCCCAAAGAAGATGACATGGATGAAGATGAGGAAGAAGAGGAAGAGGAAGATGAAGATAACGATGAAGATGAAACAGGAAGCAACGTTCGACAAACCTTGGTACGTGACAGTTTAGAAATGGTGATGCAGGTGGAGATGGCGGAGGAGTCACCAAATAACGGTTCTAACAACTTGGACTCGGATTTTCATTTGTTAGCGGTGACCCAGCAACTCGGGTACCCACTCAGTGTATCTGATTCGTACCCGGTTGGTCCGAACACGATATGGGTCCCAACCCAAGATCCGTTTCGAACATTTCAACTTCAACTACCGGCCTCAGTAATTCCACTTTCTCCTCTAGAAGACATGGCACAAGAAGATACTCACTACTCTCAAACAGTATCCAACATCATCGAAAATCAGTATACTCGTTGGGCTGAATCACCCTCCATTGGTTACTCCACCCTGCAATCAGCTTTCACCAAGTGGAACACCTGTTCGAACCACCACCTCCCCACGGCGGTAATGAACGGCATCTCTCAGCGGCTTCTCAAGTACATTCTCTTCACTGTCCCGTGCTTACACGCTAAGAACCACGAAGAGAAATATTCCCCTCAAACCCTAGACGCCACCACTGCTTCTGGGGGTGACTCTGTGGCCCATCTACGCGGCAAAGGGACACCGCAAGATGAACTGAGCGCCAACCATGTGCTGGCGGAACGCCGCCGCCGAGAGAAGTTGAATGAGAGGTTCATCATTCTAAGGTCACTTGTGCCCTTTGTGACCAAAATGGATAAGGCTTCGATTCTTGGTGACACCATTGAATATGTGAAACAGCTTCTCCGGAAAATTCAAGACCTAGAAACGCGTAACCAACTAATATTGGAGACGGAACAACAACGTTGGAGAAACACGGAGGTTATAGAGGTGCAGAGAACGAGTACTAGCAGCTCCACGAAGGAGCAACAGAGAAGTGGGGTCACAGTGACGGTGGGGCAAGAGAAGAGGAAGTTGAGGATCATAGAGAAGGAGGTTGAGGAAGCTTTAACGTCAGTGCAAGTTTCGATCATAGAGAGTGATGCATTGTTGGAATTGGAGTGTCCTCATAGAGAAGGGTTGCTTCTTGATGTGATGCAGATTCTGAGGGAGTTGAGGATAGAGGTTATAGGAGTGCAATCATCTTTGAATAATGGTGTTTTTGTGGCAGAGTTGAGGGCTAAGGTGAAGGAAAATATGAACGGGAAGAAGATTAGTATTGTTGAAGTTAAGAGAGCACTCGACCAAATTATACCACACACTACTCACTAG 1992 0.4749 MAATALGSSSSLQIMLQAAVQSVQWTYSLFWQLCPQRAILVWGDGYYNGAIKTRKTVQPMEVSAEEATLQRSQQLRELYETLSAGETNQPTRRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHLWLACADEVDSKTFSRAILAKSAHIQTVVCIPLSDGVVELGTTDKVQEDINFVQHINTFFTDIPHFHHHHHHPPPPNPALSEHSTSNPTSSSAADIPATNVPKEDDMDEDEEEEEEEDEDNDEDETGSNVRQTLVRDSLEMVMQVEMAEESPNNGSNNLDSDFHLLAVTQQLGYPLSVSDSYPVGPNTIWVPTQDPFRTFQLQLPASVIPLSPLEDMAQEDTHYSQTVSNIIENQYTRWAESPSIGYSTLQSAFTKWNTCSNHHLPTAVMNGISQRLLKYILFTVPCLHAKNHEEKYSPQTLDATTASGGDSVAHLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLLRKIQDLETRNQLILETEQQRWRNTEVIEVQRTSTSSSTKEQQRSGVTVTVGQEKRKLRIIEKEVEEALTSVQVSIIESDALLELECPHREGLLLDVMQILRELRIEVIGVQSSLNNGVFVAELRAKVKENMNGKKISIVEVKRALDQIIPHTTH 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0159 663 MobiDBLite consensus disorder prediction 198 269 - -
Lal24g0159 663 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 461 523 IPR036638 GO:0046983
Lal24g0159 663 PANTHER TRANSCRIPTION FACTOR TT8 11 660 - -
Lal24g0159 663 SMART finulus 465 514 IPR011598 GO:0046983
Lal24g0159 663 MobiDBLite consensus disorder prediction 238 259 - -
Lal24g0159 663 Pfam Helix-loop-helix DNA-binding domain 462 508 IPR011598 GO:0046983
Lal24g0159 663 MobiDBLite consensus disorder prediction 216 231 - -
Lal24g0159 663 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 194 IPR025610 -
Lal24g0159 663 PANTHER TRANSCRIPTION FACTOR TT8 11 660 - -
Lal24g0159 663 Gene3D - 460 533 IPR036638 GO:0046983
Lal24g0159 663 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 459 508 IPR011598 GO:0046983
Lal24g0159 663 Coils Coil 505 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0159 Lal-Chr24 1150978 1163243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0159 350 662 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 38.339 9.53e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal24g0159 bHLH-MYC_N 1.2e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0159 - - lang:109346631 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0159 24 1150978 1163243 Lal24g0159 24 1150978 1163243 ECH