Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0145 ATGATTCCTTTTCCATCATCACACTTCTTCTTCTTCGTGTTTCTTCTTTCTATCCCCTTCGCTCATTCCGAATCATCTACATGTTTGACAGTGTACAATAACGGTGGTGCTCCCGCGGTTTTCAAATCCCCAAAATGCCCTCGTTGGAAGCTCTCCCATTACGATTCTCCTTCTCAATCCACCGCGCGTTGCCACAACGCGATTCTCCAGGGACGCAGAATCTCACAGGAGGATCGCACTCTCTGTCTCCAAGATCTTCATATTCCATTCCCTGGTACAAATGGAATCAAGGACGTTGTGCTTGGGATTGTAGCGGTTTTCGATGGTCATAACGGCGCAGAAGCTAGTGACACGGCGTCAAAACTTTTGGTCGAGTATTTTGTTTTGCATACTTATTTTCTTATTGATGCTGCGTATTCTGTTATGTTCAAAACGTCAATGGGATCATGGCCTTATAAGAGAGATCGTGATTGGGTAAACATGCTTCAAAGATGGAAAGAGCTTCTAGGTTGGCACGAATTATATAATCAAAGGTTTCAGAATACATTTACTTCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAATCCAAGATATAGATGCAAAATTTTCTGAGGAAGCCTCTAGAAGTAGCATCTATTCAGGATCTACGGCAACCATTGCATTGGTTGCAGATGGTAAAGTTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTGTGTTCTGAAAAATTTCTGTCTCCTAAAGAGGCGAAAGCCTCATTAATAAAGGTACACAGGCAGAAAGAACATGACGGTTCTGTTTCTGTATTATGGGACCGTGAAAAGTATAGATTGATTTCCTCCCAGGGACTCACTCATTTTGCAGTGAAGGAATTGACCAGTGATCATCACCCAGACAGAGATGATGAGAGAATTCGAGTGGAAACAGCTGGTGGACAGGTTGTAACTTGGGGTGGGGTGCCGCGCATAAATGGTCAGCTGGCTGTTTCACGAGCTATTGGTGATGTATTCCTCAAAGGATATGGTGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTCTGACTGCTAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTTTTTGAGAAGATGAGCGTGCAGGATGTTTGTGATTTGTTGTGGGATGTACACCATTTTGGTAACATGAGATCCGAGTGTACCCCTTCATCTTCCTTTTCATTGGCAGAATTTATTGTTAAAACTGCCTTCGAAAAGGGCAGTATGGACAATGTGGCAGCAGTAGTCGTTCCTCTAGAATCTGCTAAATTTTCTGTAAATTCACCTAGGAGAAGCTATGTTGAAAAGATTGATTCAGATTTTCCACTAGTTGGTCTGCAGGATCTTGCTTCCAGAAGCTCAGCTAATGACATCACATTTGGTCTAATGCACTTGGAGCATCATCATCCAGTGGATACCAAGTTTAAACGCATATTGGTAGAAGTGAAACGTGGTGATTCTGGATGTTTTTATTTATCTGAAAATCTTGATGCATTGGTGGATTCTAAGCAGTCTGCCAATAAGACTGACTTGGAAGACTATTTGTATGAACTACCTCAGCCTTCATCAGATGCCCTTCATCAATATTCTGCAGTAGGTGATCCTTTACATTTGTACAACAACCAAAACTTTTGCTTTCTCCCTGGTCTGACTGCTAGTGAAGACAAAGACCAATGCATAAATCCTGAAGGCTTTGCTAATTTTATTGGTCTTCTTGAATCGATTCCTTTACATGATACTGATCCAAATAATGGTTCTTCTGATTACTCAATGCCTGATTTGAGGTATGTACTAAAGAAGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTAGCTTTTCATTGGAATTGTAATCAAGGTAGCAATGCTGCAGAAATGAGCAAGGATGACAATAATAGAAACAACAGCTCAACTATTCCTGATTGTCAAGAGGGTCCTTCTAACTACACTTTGTACATTTTAAAACGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGACTGAGGGAGAAGCATTTTGGAGAAATCTTCTTAAATGCCTCTATATGCTTTGAAGATTTATTATCAGCTGGAAAATCAAAATGTGTCTTGGAAACATCACAATTTGGTTCTGAGAATTCATTTCCAAACAAATTTGGGCATCAAAGAGCCATACATGAAGAAGGTTTGAGACACATTGCAAGATATGTGGAGTCTTTTGAGTCTCGATCAAATGAAATATGGCTTGTGTTCAGTTATGAAGGTCTGTCATTGTCGAAACTTTTGTATACTGTGGAAGATGCAAAGACTGTTGAAAATGAAAAAAATGAGGAAGCAGAACATGCTCAGATACTTCGCCCATCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGACAAGAGGAAATGCGCAACCTTATCTGGCAGCTGTTGATGGCGCTCAAGTCTTGTCACGATCGCAATATCACACATAGGGACATTAAGCCTGAGAATATGGTGATATGCTTTGAAGACCAAGAGACTGGGAGATGCTTGAAAGAGATTCCAACTAAAATTAATAAATTTTCCACCAAAATGCGAATTATCGATTTTGGCAGTGGAATTGATGATTTCACATTAAAACATTTATATGGATCTACTGGACCTTCTAGAGCTGAACAAACGTATGAGTATACACCTCCTGAAGCTTTGCTGAATGCTACATGGTATCAAGGGCCAAGAAGCTCGAATTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGTCGCCAAATGTTTTCCAGATAAATGATTTTACACGTGCTCTTTTGGACCGGCAACTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCGTTCATGGAATTGTGTATCTTAATCCCTGGGATTTCTGGAAGTTCCTCAAAAAAGTATCATACAGTGAACCAAGTTGGAGTTTCACCTGCTTCCTGGAAGTGTTCTGAAGAATTCTTTTCTCGTCAAATTAAGAGTCGAGATCCTCTTAAGATAGGTTTTTCAAATATCTGGGCTTTACGGTTAGTGCGCCATCTGTTACTCTGGGACCTGGAGGATCGACTAAGTGTTGATGAGGCATTACAACATCCCTATTTCCAACCTCCCCCAAAAACATGA 3207 0.4069 MIPFPSSHFFFFVFLLSIPFAHSESSTCLTVYNNGGAPAVFKSPKCPRWKLSHYDSPSQSTARCHNAILQGRRISQEDRTLCLQDLHIPFPGTNGIKDVVLGIVAVFDGHNGAEASDTASKLLVEYFVLHTYFLIDAAYSVMFKTSMGSWPYKRDRDWVNMLQRWKELLGWHELYNQRFQNTFTSNFDDSFHLEILKEALLRAIQDIDAKFSEEASRSSIYSGSTATIALVADGKVLVANIGDSKAFLCSEKFLSPKEAKASLIKVHRQKEHDGSVSVLWDREKYRLISSQGLTHFAVKELTSDHHPDRDDERIRVETAGGQVVTWGGVPRINGQLAVSRAIGDVFLKGYGVISAPEVTDWQPLTANDSYLVAASDGVFEKMSVQDVCDLLWDVHHFGNMRSECTPSSSFSLAEFIVKTAFEKGSMDNVAAVVVPLESAKFSVNSPRRSYVEKIDSDFPLVGLQDLASRSSANDITFGLMHLEHHHPVDTKFKRILVEVKRGDSGCFYLSENLDALVDSKQSANKTDLEDYLYELPQPSSDALHQYSAVGDPLHLYNNQNFCFLPGLTASEDKDQCINPEGFANFIGLLESIPLHDTDPNNGSSDYSMPDLRYVLKKSFGRGSYGEVWLAFHWNCNQGSNAAEMSKDDNNRNNSSTIPDCQEGPSNYTLYILKRIMVERGSAVYLSGLREKHFGEIFLNASICFEDLLSAGKSKCVLETSQFGSENSFPNKFGHQRAIHEEGLRHIARYVESFESRSNEIWLVFSYEGLSLSKLLYTVEDAKTVENEKNEEAEHAQILRPSKWWHWLKTTEEGQEEMRNLIWQLLMALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKINKFSTKMRIIDFGSGIDDFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPRSSNLKYDMWSVGVVMLELVLGSPNVFQINDFTRALLDRQLEGWNEGVKELAYKLRSFMELCILIPGISGSSSKKYHTVNQVGVSPASWKCSEEFFSRQIKSRDPLKIGFSNIWALRLVRHLLLWDLEDRLSVDEALQHPYFQPPPKT 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0145 1068 SMART serkin_6 613 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0145 1068 SUPERFAMILY PP2C-like 61 437 IPR036457 -
Lal24g0145 1068 PANTHER ALPHABET, ISOFORM E-RELATED 16 600 - -
Lal24g0145 1068 ProSiteProfiles PPM-type phosphatase domain profile. 63 436 IPR001932 -
Lal24g0145 1068 ProSiteProfiles Protein kinase domain profile. 613 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0145 1068 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Lal24g0145 1068 CDD PP2Cc 70 436 IPR001932 -
Lal24g0145 1068 Pfam Protein phosphatase 2C 194 251 IPR001932 -
Lal24g0145 1068 Pfam Protein phosphatase 2C 288 429 IPR001932 -
Lal24g0145 1068 Pfam Protein kinase domain 810 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0145 1068 SMART PP2C_4 55 434 IPR001932 -
Lal24g0145 1068 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 16 600 - -
Lal24g0145 1068 Gene3D - 59 442 IPR036457 -
Lal24g0145 1068 SUPERFAMILY Protein kinase-like (PK-like) 612 1064 IPR011009 -
Lal24g0145 1068 Gene3D Transferase(Phosphotransferase) domain 1 802 1063 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0145 Lal-Chr24 1071244 1084123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0145 677 1068 PP2C-type Phosphatase Gene Family AT3G63340 65.909 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Lal24g0145 Pkinase 2.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0145 - - gmx:100781476 1733