Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0138 ATGGAGGAGGTTGAAGTAGCTAACAGAGCAGCTGTTGAAAGCTGTCATAGAGTTCTTAGTATGTTGTCTGAGCCCAAGGGTCAGAATCAGCAAAGGAATTTAATGGTGGAAACTGAGGGAGCAGTGGCAAGGTTCAAGAAAGTTGTGTCCTTGCTACATAATGGTTTGGGTCATGCTAGAGTCAGGAAGCTTAAGAAACTTCAAGTCCCCTTTTCCCAAAGTATTCTCTTAGATAACCCAAATTGTCAAAGCAAAACCATCAACCATTCTAAAAATCTTCACTTTCCCCATACCCAAACCAGCTTTCCTGAGAATTCAGTTCAGGATTTTGGCTCAAGTGTTGTTAGGAACACACTCTCTCTTGGAAACCCATCTTTGGAATTGAGCTCCAGTGGGAAAACTCCTTTTCAGCTTGTGCAACAAGCTTCATCGGCTCACTATCACATCCTTCAGCAGCAGCAGCAGCAGCAGCAACAACAAAGGTTGATGGTGCAGCAGCAACAAATGAAACATCAAGCAGAAGTTATGTACCGGAGGAACAATAACAGCGGCATAAACTTGAACTTTGACAGCACTAGCTGCACGCCAACAATGTCATCTACCAGGTCTTTCATCTCTTCCTTGAGTATAGACGGAAGTGCAGCGAACGTGGATGGAAGCACCTTCCATTTAATTGGAGCTCCACACTCTTCAGACCAGAATTCACAACAGCATAAGAGAAAATGCTCTGCCAGAGGCGATGAGGGCAGCGTGAAATGTGGGAGCAGTTCTCGATGCCATTGCTCAAAGAAGAGGAAGAATAGAGTGAAGAGATCAATCAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATCCCTCCCGATGACTATTCCTGGCGGAAGTATGGGCAGAAGCCTATCAAGGGCTCTCCTCACCCTAGAGGATACTATAAGTGCAGCAGCATGAGAGGCTGCCCTGGTAGGAAGCATGTTGAAAGGTGTTTGGAAGAACCAACAATGCTGGTTGTTACCTATGAAGGAGAGCATAACCACCCTAAGCTACCAGCACAATCTGCAAATGCGTGA 1065 0.4563 MEEVEVANRAAVESCHRVLSMLSEPKGQNQQRNLMVETEGAVARFKKVVSLLHNGLGHARVRKLKKLQVPFSQSILLDNPNCQSKTINHSKNLHFPHTQTSFPENSVQDFGSSVVRNTLSLGNPSLELSSSGKTPFQLVQQASSAHYHILQQQQQQQQQQRLMVQQQQMKHQAEVMYRRNNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSAANVDGSTFHLIGAPHSSDQNSQQHKRKCSARGDEGSVKCGSSSRCHCSKKRKNRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPGRKHVERCLEEPTMLVVTYEGEHNHPKLPAQSANA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0138 354 Pfam Plant zinc cluster domain 239 284 IPR018872 -
Lal24g0138 354 ProSiteProfiles WRKY domain profile. 281 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0138 354 Gene3D WRKY domain 270 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal24g0138 354 SMART WRKY_cls 286 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0138 354 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g0138 354 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 353 IPR044810 GO:0003700
Lal24g0138 354 SUPERFAMILY WRKY DNA-binding domain 284 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal24g0138 354 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 353 - -
Lal24g0138 354 MobiDBLite consensus disorder prediction 228 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0138 Lal-Chr24 1000127 1003131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0138 1 351 WRKY Transcription Factor Family AT2G30590 55.959 1.50e-126 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal24g0138 WRKY 7.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0138 - - gmx:100170681 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0138 24 1000127 1003131 Lal24g0138 24 1000127 1003131 ECH
Lal12g0176 12 1237421 1240113 Lal24g0138 24 1000127 1003131 LSH
Lal13g0150 13 967017 969914 Lal24g0138 24 1000127 1003131 LSH