Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0137 ATGATGACAGACATGTTTGAGAAGCAGACATCTTCTGATGTTTCAAATTATGCATCAAGCAGTGGTTTGTCAGGGGATGATAAAGAGATTGGGTATGAAGCTGCAACATTCAACCATCAATATCTTTCAGCCAAAAACTCTATTTTTCACTTCTTACCCTTCAAAATTGACCTCAATTTTGCTCGCATGGTGATAGCAGAGGTGATGGGTACTTTTATATTGATGTTCTGTGTATGTGGAATCATTGCAACCACACAACTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGTCACAGCAGGATTAACAGTGGTTGTGATAATATTCTCCATAGGACCAATATCTTGTGCGCATGTTAACCCAGCTGTCACAATAGCCTTTGCCACACTCGGTCATTTTCCATGGATCAAGGTTCCAATTTACATAATAGCTCAGACAATAGGTTCTGTGGTTGCAACATATATTGGTAGCCTTGTCTATGGCATTAAATCAGAAATTGTGATGACTCAGCCACTCCAAGGGTGCAACTCTGCCTTCTGGGTTGAAGTTATTGCAACCTTCATCATCATGTTCCTCATTGCAGCTTTGACATCTGAATCTCAATCAGTAGGCCATTTATCTGGCTTTGTTGCAGGAATGGCAATTGGGCTTGCTGTACTAATCACAGGGCCTGTGTCAGGTGGATCAATGAATCCAGCAAGATCATTAGGTCCAGCAATTCTCTCATGCAAATATAAAGACATATGGATATATATCATAGCCCCAAGTGTTGGAGCTGTTGCAGGAGCTTTCATGTTTCGTTTTCTACGTCTTAGAGACCAACCTTGTAGCACTTTGTCCTCCCCAAACATCACTCATGTTGCTCGTCCAATACCCTTTTGTTCAATGGCACCTGAATCTTGTTCTCCACAAGATGGGAAAACAACAAGCTTCACACAAATCATGGTTGCTTCCTCCATTGGTTTGATGTTTGCTTTTGCAATGCATTATCGTCTAAAAAATATCAGAGATCGAAAGATCATTCCACGTCTCAGATTATCTAAACATGCCCAACCTCCTAAGCTTGAAAGGTTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGATAGGAGAAGTTGTCCACATTTATGTAAATTGGCTTCTGAATATATAAGGAAATGTGAGGGATGTGAAGATGACATATACGCCTTCTTTGAGAATGAACCAGATGCGGATTCACTATTTGTCAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTCAGTTACTTTGCTTTCCATTGGAAACATGGTGATGTATTGATAAGTCAGGTGTTGAGCTCAGAAACTGAGCCAAAAAGGAAGCTCAAGAACATAGTTATGGCTGCAACTAGAGAACAAAGGGTGGAGAGAGTAACCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACATTAGTAGAAGAGATGAAAGCAATGGGACTTGTATCAGCTGATGATTCTCAATGCACAGAGGTGATGGCTCCAGTAGCTCACAGTGATAGAAGTCCAGTGCTCCTTTTCATGGGTGGTGGTATGGGAGCTGGCAAAAGCACTGTCCTTAAAGAGATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGGAATGCTGTTGTTATTGAAGCAGATGCATTTAAAGAATCAGATGTCATCTACAAGGCCCTTAGTTCAAGAGGGCATCATGATATGATTCGAACAGCTGAACTGGTACACCAATCATCTACAGATGCAGCCTCATCCCTTCTGGTGACAGCACTGAATGAGGGGAGGGATGTAATTATGGATGGAACACTGTCCTGGGTACCATTTGTTGTACAGACAATAACAATGGCCAGAAATGTCCACCGTCGCCGTTACCGAATGGGTGCTGGCTACAAGAGGAACCATGATGGAACTGCAACTGAAAACTACTGGGAAAGAATTGAAGATGAAGAACCTGAACAAGTTGGAGGGAAAAAGAGAAAACCATATAGGATAGAACTTGTTGGAGTAGTATGTGATGCTTACCTTGCAGTCATTAGAGGCATAAGGAGGGCTATAATGTGTAGAAGAGGAGTAAGAGTGAAACCACAATTGAAATCACATAAGAGATTTGCTGATGCATTTATGACTTATTGTCAACTAGTAGACAATGCCAGGCTATACAGTACAAATGCTTTGGAAGGGCCACCAAAGTTGATAGGATGGAAAGATAGAGACAAGACATTGCTGGTTGATCCAGATGAAATAGACTGTTTGAAGAAGGTTGCTAGGTTGAATGAAGATGCCAACTCAGTATATGAACTTTACAAGCACCCAAACCCAGTCTGTGAAGCTGGATCCATATGGAAAGATATTGTATTATCACCTTCAAGGTTGAATATCCAGCAGGAGCTCAAGTATTCTATCCAAAAAGTTGAGATATATAAAAGTTGTTTATGA 2439 0.4141 MMTDMFEKQTSSDVSNYASSSGLSGDDKEIGYEAATFNHQYLSAKNSIFHFLPFKIDLNFARMVIAEVMGTFILMFCVCGIIATTQLQNGAVGLLEYAVTAGLTVVVIIFSIGPISCAHVNPAVTIAFATLGHFPWIKVPIYIIAQTIGSVVATYIGSLVYGIKSEIVMTQPLQGCNSAFWVEVIATFIIMFLIAALTSESQSVGHLSGFVAGMAIGLAVLITGPVSGGSMNPARSLGPAILSCKYKDIWIYIIAPSVGAVAGAFMFRFLRLRDQPCSTLSSPNITHVARPIPFCSMAPESCSPQDGKTTSFTQIMVASSIGLMFAFAMHYRLKNIRDRKIIPRLRLSKHAQPPKLERFSHYVARQMGFKDRRSCPHLCKLASEYIRKCEGCEDDIYAFFENEPDADSLFVKLVEEFERCILSYFAFHWKHGDVLISQVLSSETEPKRKLKNIVMAATREQRVERVTKNLKVARVFNTLVEEMKAMGLVSADDSQCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKEILKEPFWAGAAGNAVVIEADAFKESDVIYKALSSRGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGAGYKRNHDGTATENYWERIEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRGVRVKPQLKSHKRFADAFMTYCQLVDNARLYSTNALEGPPKLIGWKDRDKTLLVDPDEIDCLKKVARLNEDANSVYELYKHPNPVCEAGSIWKDIVLSPSRLNIQQELKYSIQKVEIYKSCL 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0137 812 Gene3D Glycerol uptake facilitator protein. 26 278 IPR023271 -
Lal24g0137 812 PANTHER UNCHARACTERIZED 306 809 IPR044802 -
Lal24g0137 812 ProSitePatterns MIP family signature. 119 127 IPR022357 -
Lal24g0137 812 Gene3D - 493 729 IPR027417 -
Lal24g0137 812 Pfam Zeta toxin 504 617 IPR010488 GO:0005524|GO:0016301
Lal24g0137 812 Pfam Major intrinsic protein 59 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 642 IPR027417 -
Lal24g0137 812 SUPERFAMILY Aquaporin-like 58 276 IPR023271 -
Lal24g0137 812 CDD MIP 62 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 PRINTS Major intrinsic protein family signature 62 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal24g0137 812 MobiDBLite consensus disorder prediction 1 23 - -
Lal24g0137 812 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 306 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0137 Lal-Chr24 992664 998491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0137 64 281 Major Intrinsic Protein MIP AT5G37820 42.922 4.52e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0137 - - mtr:MTR_1g070385 1357.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0175 12 1225845 1229180 Lal24g0137 24 992664 998491 LSH
Lal20g0017 20 149633 153626 Lal24g0137 24 992664 998491 PCT
Lal24g0137 24 992664 998491 Lal20g0017 20 149633 153626 PCT