Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0134 ATGATGCGGGTGGTAGCGGAAAACCTTGAGTATCTGATGGGCATTCCGGAAAACATAGTTGTCGGTTCCCATGTTTGGGTTGGAGATCCAGAATTAGTTTGGATTGATGGACAAGTACTGAATATTAATGGAGATGAAGCTGATATTCAAGCTAGCAATGGGAAGAAGGTTGTTTCCCGTTTATCAAAATTACATCCCAAGGACACGGAGGCTCCTACAGATGGAGTTGATGACATGACCAAGCTTGCATATTTGCATGAGCCAGGGGTGCTGCATAATTTGGAAATTAGATACAAGATGAATGAAATATATACTTACACTGGAAATATTCTTATTGCTATCAATCCATTCCAAAGTCTTCCAGACCTGTATGATGCAAATATGATGAAACACTACAAGGGAGCAACATTGGGAGATTTGAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTACCGACGAGAAAAGTAATTCTATCCTGGTCAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAATGCTTATGTGTTACCTAGCATATTTGGGTGGTCGCGTTGCATCTGAAGGAAGGACTGTTGAACAACAAGTTCTTGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATAACAATTCCAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCTGGTGCAGCCATTAGAACTTATCTGCTAGAGAAATCTCGAGTTTGCCAAATATCAGATCCTGAGCGTAACTATCACTGTTTTTACCTTCTTTGTGCTTCTCCCCCCGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAGAGCATTTCACTACCTAAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAATATCTTAGCACCAAGAGAGCCATGGATATTGTTGGAATTAGTCAGGAAGAGCAGGATGCAATATTCAGAGTTATAGCTGCTATTCTTCATATTGGAAACATTAAGTTTGCAAAATCAGAAGAAACAGATTCATCGGTTCTTGAAGATGAAGAGTCCAAGTTCCATCTCCAAACAACAGCAGAACTTCTAATGTGTGATCCTAATGCTTTGGAAGATGCACTTCGTAAGCGTGTGATGATTACCCCAGAAGAAATTATCACGAGAAGTCTTGATCCTATTGGTGCAACAGTTAGTAGGGATGGTTTAGCAAAGACACTATATTCTCGTTTATTTGACTGGTTAGTCTATAAAATTAATGTCTCCATTGGGCAGGATCCTAGCTCAAAAGTTCTCATTGGCGTTCTTGACATATACGGCTTTGAAAGTTTTGTTTCTAATAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAAAAGCTGCAACAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAACAATATACTAAAGAAGGGATTAATTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTTATTGAAAAGAAACCGGGTGGAATCATTGCTCTGCTTGATGAAGCTTGTATGTTTCCAAAATCAACTCATGAAACATTTTCGCAAAAGCTTTATCAGACGTTCAAAGATCACAAGCGCTTCATCAAGCCAAAATTGGCACGCTCGGACTTCACTGTTGTTCATTATGCAGGGGAGGTCCAGTATCGGTCTGAGCAGTTTTTAGACAAAAATAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGTGCTTCCAGATGTTCATTTGTATCAGGCCTTTTCCCCCCACTTTCTGAGGAGACAGCCAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTGCAACAATTGATGGAAACTCTCAATCTGACAGAACCCCACTATATTAGGTGTGTGAAGCCAAATAATCTATTACAACCTGGAATATTTGAGAATATGAATGTCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCAGTACGAATTAAATGTGCTGGATTTCCCACTCATAGGACTTTTCATGATTTTTTAACTCGAGTAGGAATTCTTGCTCCAGAAGTCCTTCTAGGGAACTTCAATGAAAAAGATTCTTGTAAAATGATTTTGGAGAAGATTGGCCTATCAGGTTATCAGATAGGGGAAACACAAATATTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCACAGAGAGCACGCCTGCTTAACAATTCTGCAACAGTTATCCAGAAGCAGATTAAAACTCATTTTAGTAGGAAAGCTTATGTTGCATTGTGGAAGTCCTCTGTGTTTATGCAATCCATTTGTAGAGGGGAATTGGCTCGGAGATCATATTATCACATGAAGAGGGAGGCAGCTGCAGTTAGAATTCAATCAAAGATGCGAGGAAAACTAGCCAGAAAGAAGTACACTGAAATAAAGATTTATGCCATCATCTTGCAGACTGGTTGTCGAGCAATGGTTGCTCGAGATAAATTGAGATACAGAAGGCATTCTAGGCAAACTAGTGCATCAACTAGTATTCAGTCCTATTGGCGCCGACATAGAGCTCTCTTTGAGTATCAAAACCTTAAGAAAATGTCAATCATTTCACAAAGAGACAATCATGCTATGGATAATCACGAACAGGAAGTTGCTTTGGAGAAATCGGTGGAAAATGAAAGTCCTTTTGTTGAAGAATTTTCAAATCCTTTCCAAGCAGAGTCCCCAGATCCTTCCCATGAAGAATCCCAAATTCCTTTCCAAGAAGAATCCTCAAATCCTTTGCAAGATTGTGAAAGCGTTGAAGCTACAATGGGTTCCTCTATACCTTTCCAAGACACTGAAAAGACGGAGATTCTTACTGCAGAAATAAAAAACTTGAAGATCATGTTGCAGGAAGAAAAACAAAGAGCAGATGAATATGAAAGGAAATATATAGAAGCTGAAGGATCAACTGAAGAGTTACGAAAGAAATTAGCAGAGACTGAAAAAAGAGTATATCAGCTTCAGGACTCATTGAACAGATCTGAATTAGTGTGTATCAGGATGATATCTTCCATGTCAAGTCAAGTTGCGGACCTGAAGATGATCTTAAGTACTTCATCAAGATTGAGCTCAACTTTTCGACCTATTGCTAGAGTTGATGTCGCTTCCAGTAACTCTGATACTTCATCCACAGACTCTGATTTCACATTTCCAGCTACTGTTTCAAATCCAGAAGATACTTCTTCTTCCCAGCCAAGCTCTTTTCAATTAATAGTTCAGGATATCTCTGCAGTGGATGGATCAGGTTCTGAAAGTGAAAAAGAGGGTTCATTTGATGATTTCTTCTAG 3351 0.3906 MMRVVAENLEYLMGIPENIVVGSHVWVGDPELVWIDGQVLNINGDEADIQASNGKKVVSRLSKLHPKDTEAPTDGVDDMTKLAYLHEPGVLHNLEIRYKMNEIYTYTGNILIAINPFQSLPDLYDANMMKHYKGATLGDLSPHVFAIAEAAYRAMITDEKSNSILVSGESGAGKTETTKMLMCYLAYLGGRVASEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRAFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHIGNIKFAKSEETDSSVLEDEESKFHLQTTAELLMCDPNALEDALRKRVMITPEEIITRSLDPIGATVSRDGLAKTLYSRLFDWLVYKINVSIGQDPSSKVLIGVLDIYGFESFVSNSFEQFCINFTNEKLQQHFNQHVFKMEQEQYTKEGINWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFTVVHYAGEVQYRSEQFLDKNKDYVVPEHQDMLSASRCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQQLMETLNLTEPHYIRCVKPNNLLQPGIFENMNVIQQLRSGGVLEAVRIKCAGFPTHRTFHDFLTRVGILAPEVLLGNFNEKDSCKMILEKIGLSGYQIGETQIFLRAGQMAELDAQRARLLNNSATVIQKQIKTHFSRKAYVALWKSSVFMQSICRGELARRSYYHMKREAAAVRIQSKMRGKLARKKYTEIKIYAIILQTGCRAMVARDKLRYRRHSRQTSASTSIQSYWRRHRALFEYQNLKKMSIISQRDNHAMDNHEQEVALEKSVENESPFVEEFSNPFQAESPDPSHEESQIPFQEESSNPLQDCESVEATMGSSIPFQDTEKTEILTAEIKNLKIMLQEEKQRADEYERKYIEAEGSTEELRKKLAETEKRVYQLQDSLNRSELVCIRMISSMSSQVADLKMILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPATVSNPEDTSSSQPSSFQLIVQDISAVDGSGSESEKEGSFDDFF 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0134 1116 Gene3D - 679 742 - -
Lal24g0134 1116 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 17 1054 - -
Lal24g0134 1116 SMART iq_5 769 791 IPR000048 GO:0005515
Lal24g0134 1116 SMART iq_5 746 768 IPR000048 GO:0005515
Lal24g0134 1116 SMART iq_5 845 867 IPR000048 GO:0005515
Lal24g0134 1116 SMART iq_5 817 839 IPR000048 GO:0005515
Lal24g0134 1116 SMART iq_5 794 816 IPR000048 GO:0005515
Lal24g0134 1116 Gene3D - 264 322 - -
Lal24g0134 1116 Gene3D Kinesin motor domain 77 674 IPR036961 -
Lal24g0134 1116 SMART MYSc_2a 68 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 20 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 PANTHER MYOSIN 17 1054 - -
Lal24g0134 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 798 875 IPR027417 -
Lal24g0134 1116 Gene3D - 797 847 - -
Lal24g0134 1116 Gene3D - 746 796 - -
Lal24g0134 1116 ProSiteProfiles IQ motif profile. 795 821 IPR000048 GO:0005515
Lal24g0134 1116 ProSiteProfiles Myosin motor domain profile. 74 744 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 ProSiteProfiles IQ motif profile. 822 847 IPR000048 GO:0005515
Lal24g0134 1116 Gene3D Myosin VI head, motor domain, U50 subdomain 324 613 - -
Lal24g0134 1116 CDD MYSc_Myo11 88 732 IPR036018 -
Lal24g0134 1116 MobiDBLite consensus disorder prediction 907 935 - -
Lal24g0134 1116 Pfam IQ calmodulin-binding motif 773 790 IPR000048 GO:0005515
Lal24g0134 1116 Pfam IQ calmodulin-binding motif 797 815 IPR000048 GO:0005515
Lal24g0134 1116 Pfam IQ calmodulin-binding motif 749 767 IPR000048 GO:0005515
Lal24g0134 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 797 IPR027417 -
Lal24g0134 1116 Coils Coil 956 1011 - -
Lal24g0134 1116 ProSiteProfiles IQ motif profile. 846 873 IPR000048 GO:0005515
Lal24g0134 1116 PRINTS Myosin heavy chain signature 104 123 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 PRINTS Myosin heavy chain signature 161 186 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 PRINTS Myosin heavy chain signature 208 235 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 PRINTS Myosin heavy chain signature 441 469 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 PRINTS Myosin heavy chain signature 494 522 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 MobiDBLite consensus disorder prediction 1056 1088 - -
Lal24g0134 1116 ProSiteProfiles IQ motif profile. 772 799 IPR000048 GO:0005515
Lal24g0134 1116 Pfam Myosin head (motor domain) 76 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 Pfam Myosin N-terminal SH3-like domain 22 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal24g0134 1116 Gene3D - 451 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0134 Lal-Chr24 961848 975566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0134 13 1019 Myosins gene family AT1G54560 63.324 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0134 K10357 - gmx:100803485 1780.76