Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0106 ATGGAAGATTCAGATGAAGATGAGCTTCTGAATCTCACCCTTTCAGTTGCTGCTGATAGAGAAAGAAAAAAGAAGGGAAAAATAATAGTATGGGATAATAATAATATTGCTTGTTCTATGAGTACTACTACTACTACTACTCATAATATGAACCCTTATTATGAGGAAGGGTATGAAGGTAAGATCTATAGGCTTCTCCAAATGAGGGATGAAATGGTAAGACAAGACCATAGAATAAGGAATAAAGGAGTTGTTGATGAAGATGGGAATGGCCTTCCATTGATCCATTTGCTTCTCACAACTGCCACTTTAGTTGATGACAACAACAACAACAACAAAAACAAGTTTTGTTCAGCTTTAGAGAACCTCACTGAACTCTATAAAATTGTTTCCCTAACAGGTGACTCAGTTCAACGTGTAGTTGCCTATTTCACTGATGGCTTGGTGGCAAGGCTTCTCACAAGAAACTCACCCTTCTATGACATGCTCATGGAGGAACCAACAACTGAGGAAGAGTTTCTTGCATTCACAAATCTCTATAGAGTCTCACCTTATTACCAATTTTCTCATTTCACTGCAAACCAAGCTATCTTGGAAGTGTTTGAAAAAGAAGAAGACAAGAACAACCGTGCTCTTCATGTCATTGATTTTGATGTCTCCTATGGTTTTCAATGGCCTTCTCTTATTCAATCTCTTTCTGAGAAGGCAACAAGTGGAAACAGAATATCACTCAGGATAACTGGATTTGGAAAGAACCTAAAGGAACTTCAAGAAACTGAGTCTAGGTTGATTAGTTTCTCAAAGGGTTTTGGTAACCTAGTGTTTGAGTTTCAAGGGTTGTTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAATGAGACTGTGGCAGTGAACTTGATTTCTTATTTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACATTGGGATTTGTACATTCTCTTAACCCTTCCATTGTTGTGTTGGTGGAACAAGAAGGTAGCAGGAGTCCTAATAGGACCTTCTTGTCAAGATTCACAGACACTTTGCATTACTTTGCAGCAATGTTTGATTCACTTGATGATTGTCTTCCAGTTGAAAGCACTGAGAGGTTTAGGATTGAGAAGAAGCTTCTAGGGAAAGAGATCAAAAGCATGCTCAACTATTATGACATGGATGGTGTGGATTGTCCTAAATATGAGAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGGTTTGGTGGCACAAAAATAAGCTCAAAATCTATGATCCAAGCAAAACTGCTATTGAAGATGAGAACTCATTATTGTCCACTCCAATTTGAGGAAGAAGGAGGTGGAGGTTTCAGAGTTTCTGAAAGAGATGAAGGAAGAGCTATCTCTTTAGGGTGGCAGAATACTTTTCTGCTAACAGTCTCAGCATGGCAACCACTCTGA 1449 0.3885 MEDSDEDELLNLTLSVAADRERKKKGKIIVWDNNNIACSMSTTTTTTHNMNPYYEEGYEGKIYRLLQMRDEMVRQDHRIRNKGVVDEDGNGLPLIHLLLTTATLVDDNNNNNKNKFCSALENLTELYKIVSLTGDSVQRVVAYFTDGLVARLLTRNSPFYDMLMEEPTTEEEFLAFTNLYRVSPYYQFSHFTANQAILEVFEKEEDKNNRALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGKNLKELQETESRLISFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLISYLNTLSCFMKISDTLGFVHSLNPSIVVLVEQEGSRSPNRTFLSRFTDTLHYFAAMFDSLDDCLPVESTERFRIEKKLLGKEIKSMLNYYDMDGVDCPKYERMETWKARMENHGFGGTKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNTFLLTVSAWQPL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0106 482 PANTHER OSJNBA0084A10.13 PROTEIN 8 480 - -
Lal24g0106 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 480 IPR005202 -
Lal24g0106 482 Pfam GRAS domain family 94 480 IPR005202 -
Lal24g0106 482 ProSiteProfiles GRAS family profile. 85 480 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0106 Lal-Chr24 711563 713011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0106 102 481 GRAS Transcription Factor Family AT3G54220 34.190 4.75e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal24g0106 GRAS 3.7e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0106 - - gmx:100809458 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0130 12 903952 905364 Lal24g0106 24 711563 713011 LSH
Lal2g1030 2 7077294 7078691 Lal24g0106 24 711563 713011 PCT
Lal24g0106 24 711563 713011 Lal2g1030 2 7077294 7078691 PCT