Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0102 ATGACATTAACCCAAATTTCTGAGAGACCATCAATGGATTTGGAGTCATGTGTACCTCCAGGATTTAGATTTCATCCAACAGAAGAAGAACTTGTAGGATATTACCTCAAGAGGAAGATAAATTCGCTTAAAATTGACCTAGATGTAATTGTTGAGATCGATCTCTACAAAATTGAACCATGGGATATACAAGATAGATGCAAGCTAGGATATGAGGAACAGAATGAATGGTACTTTTTCAGCCACAAAGATAAGAAGTATCCAACAGGAACAAGAACTAATAGGGCTACTGTGGCTGGATTCTGGAAAGCAACAGGAAGGGACAAAGCTGTGATGTCCAAAAACAGAATAATAGGAATGAGGAAGACCCTTGTCTTCTACAAAGGACGTGCCCCAAATGGAAGGAAAAGTGATTGGATCATGCATGAGTATAGGCATCAAACCTCAGAACATGGTCCTCCACATGAAGAAGGATGGGTTGTATGCCGAGCATTTAGAAAGCCTACTCCAAGTCAGAGACCAGGTTTTGAACCATGGTGTAGTAGTAGCCAATACCAACACTATTTGAGAGATGAAAGCCATGCAAGGCCATTAACAATTGCTGATATTTTAAATGAAACTCATAATGTGCTTCATTCTTCCGAAGATACAAGTTTTAGCAGTTTCCCCTTTAGCTCAGAGCAGCAAGATCAGTTTGTATTACCAAACCAAAATGTTATTATGGATCACAAACAACTCATTGAGCTTCCACAACTAGATAGCCCAACTGCTTCTCTATCAGCAACTTTGGCAATAAAAGAATGCAACCAATTACACTATCACAATAATAATGGCCTAACAAATGAAGAATATTGCAGTGATGAAAGGTGCAATAATAACAATAATGGACAAATTGGTGGAGTTGATTGGAAAAGCTTGGATAATTTGTTTGCTTCACAATTGTCAGATTCTTCAACAGCTTATTTTTCACAGCAAAACTTGCCCTTGATGATGCCACATAGCCATGATCTACAACCTCAAAATCAAGCTAGTCACATCCTAGGAGGCTTTCCTGATTTATAA 1062 0.3842 MTLTQISERPSMDLESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKIEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKSDWIMHEYRHQTSEHGPPHEEGWVVCRAFRKPTPSQRPGFEPWCSSSQYQHYLRDESHARPLTIADILNETHNVLHSSEDTSFSSFPFSSEQQDQFVLPNQNVIMDHKQLIELPQLDSPTASLSATLAIKECNQLHYHNNNGLTNEEYCSDERCNNNNNGQIGGVDWKSLDNLFASQLSDSSTAYFSQQNLPLMMPHSHDLQPQNQASHILGGFPDL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0102 353 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Lal24g0102 353 SUPERFAMILY NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Lal24g0102 353 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Lal24g0102 353 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Lal24g0102 353 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 328 - -
Lal24g0102 353 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0102 Lal-Chr24 684101 692804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0102 14 352 NAC Transcription Factor Family AT1G71930 54.179 8.31e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal24g0102 NAM 2.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0102 - - gmx:100811057 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0102 24 684101 692804 Lal24g0102 24 684101 692804 ECH
Lal13g0105 13 656615 660225 Lal24g0102 24 684101 692804 LSH