Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0095 ATGCCGACACCAACAATAATAACAACAAGAACATGTGTAGAAACTCCGAATGGAGACTCATCTTCCAATAATATTATGTCTCCTTCTTACTCAATCACTCTCAAGTTCATGGACGTGACCTACCAAGTGAAGAAGATAGATAACAAAACAAGCAAACGAGGTTGCATTCAGAGTTTCATCGCAACTCATCACTCATCACCACCGTCGGAAGAGAAAACTATTCTTAATTCTGTGACGGGAATAGCATACCCAGGAGAGATCTTAGCTATTCTTGGTCCATCAGGGAGTGGAAAATCAACTCTCTTAAATGCACTCTCAGGGAGAATCCATGGACACGCTCTCACTGGAACAATCCTCGCTAACTCTTCTAAACTCAACAAATCGGTTCTCCGTCGAACCGGGTTCGTCACACAAGACGACATCCTCTACCCTCACCTCACGGTTCGCGAGACTCTCGTCTTCTGCTCCATGCTCCGCCTCCCTAGGTCGCTTCCGCAAGAGGCAAAGGTCGCTGCGGCGGAGTCGGTGATGGCGGAGCTAGGGTTATCCAAGTGCCAGGACACCATAATCGGAAACAGCTTCATCCGAGGCGTCTCCGGTGGTGAAAGGAAGCGCGTGAGTATAGCGCATGAGATGTTGGTTCACCCGAGTTTGTTGATCCTGGATGAGCCCACCTCCGGGCTGGATTCCACGGCGGCGTACAGGTTGGTGACGACGCTGGGGGCATTGGCGAAGAAAGGGAAGACGGTGGTGATGTCAGTGCATCAACCGTCGAGCCGAGTGTACCAGCTGTTTGATAAGGTGCTGGTGTTGTCGGAAGGACAGTGCATATACACCGGAAAAGGAAACGAAGCGATGAGGTACTTTGAGTCGGTAGGGTTCGCTCCATCTTTTCCGGTGAATCCGGCGGATTTTCTGCTTGATCTCGCTAACGGTGTTTGCCATGTTGATGGTCTTGGTGAAAGAGATAGGCCAAACATTAAGCAGAACCTGGTTCATTCATACAACACAATACTGGCTCCTAAGGTAAAAGCTGCCTGCATGGACACTTCCAGTGTTCTTAACAAAAACACTCACCCTTTAAGAAACAACCCTTCCAAAGAATGTAGATATAGTGACAGGGTTAGCTTGTTTGATTGGTTCAACCAATTCAGTATTCTACTACAGAGAAGCATCAAAGAAAGAAAGCATGAATCCTTCAATACTCTGAGAGTTTTTCAAGTTCTTGCTGCTGCACTATTAGCTGGTTTAATGTGGTGGCACTCAGACTATAGGAACATTCAAGATAGGCTTGGCCTTCTCTTTTTCATTTCAATCTTTTGGGGTGTCTTCCCATCTTTCAACTCTGTTTTTGCATTTCCTCAAGAACGTGCCATCTTTATGAAAGAGAGGGCTTCTGGTATGTACACATTGTCATCCTATTTTATGGCTAGAATTGTTGGAGACCTTCCCATGGAGCTTATTCTTCCCACTGTTTTCCTCTCTGTGACATATTGGATGGGTGGATTAAATCCTGATTTGTGGTCCTTTGTGTTGACTTTGTTGACTGTTCTTGGATATGTACTTGTGTCACAAGGTCTTGGACTTGCTTTAGGTGCTGCAATCATGGATGCCAAGCAAGCTTCCACAGTAGCAGCAGTGACAATGTTAGCATTTGTCTTGACAGGTGGATACTATGTCCATAAGGTGCCACATTATATGGCTTGGATCAAATACATATCAACAACCTTTTACTCTTATAGGTTGCTGACTAAAATCCAATATGGTGATGGCAACAAAATCTTAAACCTATTGGGTTGCTATCATAGTGGTAGTGATAGGGCCAGCTGCAAGTTTGTTGAAGAAGATGTAGTGGGACAAATTGGCAGTGTAGCAAGCATTGGAGTGTTGTTTCTCATGTTTGTGGGTTACAGAATATTGGCTTACCTTGCCTTGAGGAGCATCAAGAGTTGA 1953 0.4537 MPTPTIITTRTCVETPNGDSSSNNIMSPSYSITLKFMDVTYQVKKIDNKTSKRGCIQSFIATHHSSPPSEEKTILNSVTGIAYPGEILAILGPSGSGKSTLLNALSGRIHGHALTGTILANSSKLNKSVLRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRSLPQEAKVAAAESVMAELGLSKCQDTIIGNSFIRGVSGGERKRVSIAHEMLVHPSLLILDEPTSGLDSTAAYRLVTTLGALAKKGKTVVMSVHQPSSRVYQLFDKVLVLSEGQCIYTGKGNEAMRYFESVGFAPSFPVNPADFLLDLANGVCHVDGLGERDRPNIKQNLVHSYNTILAPKVKAACMDTSSVLNKNTHPLRNNPSKECRYSDRVSLFDWFNQFSILLQRSIKERKHESFNTLRVFQVLAAALLAGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTVFLSVTYWMGGLNPDLWSFVLTLLTVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPHYMAWIKYISTTFYSYRLLTKIQYGDGNKILNLLGCYHSGSDRASCKFVEEDVVGQIGSVASIGVLFLMFVGYRILAYLALRSIKS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0095 650 Pfam ABC-2 type transporter 383 588 IPR013525 GO:0016020|GO:0140359
Lal24g0095 650 Pfam ABC-2 type transporter 255 319 IPR043926 GO:0140359
Lal24g0095 650 Pfam ABC transporter 76 226 IPR003439 GO:0005524
Lal24g0095 650 SMART AAA_5 84 275 IPR003593 -
Lal24g0095 650 Gene3D - 62 292 IPR027417 -
Lal24g0095 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 648 - -
Lal24g0095 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 291 IPR027417 -
Lal24g0095 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 298 IPR003439 GO:0005524
Lal24g0095 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 19 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0095 Lal-Chr24 626460 631320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0095 65 284 Calmodulin-binding Proteins AT2G36910 29.464 1.22e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0095 K05681 - gmx:100812127 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0100 13 633711 639918 Lal24g0095 24 626460 631320 LSH