Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0092 ATGGAATCTCTATCCTCCAAAAATAATAGTAAGATTGGTAAGCCTTCCCTTGAAGTAGAGGCTATGGCTCCTATAGAGCCAAGTCCTCTACGTAAGATCATTGTTGTTGCTTCTATTGCAGCTGGTGTTCAATTCGGGTGGGCCCTACAACTCTCCCTCTTAACTCCATATGTGCAGTTATTAGGTATACCTCACAAATGGTCCTCCTTCATCTGGCTCTGCGGTCCCATCTCCGGCATGCTCGTTCAGCCTGTTGTGGGATACCACTCCGACCGCTGCACCTCCCGTTTCGGACGCCGTCGTCCTTTCATTGCTGCCGGTGCACTTGCCGTCGCTATTGCTGTTTTCCTCATTGGTTATGCTGCTGATCTAGGTCACGCAACCGGCGACAACCTCCAAAAGAAATCAAGGCCTCGTGCCATTGCTATATTCGTCGTCGGGTTTTGGATCCTCGACGTGGCCAACAACATGCTCCAGGGACCATGCCGAGCCCTCCTCGCTGATCTCGCTGCCGGAGACCACCGGAAAACGAGAAACGCCAATGCGTTCTTCTCGTTCTTCATGGCAGTCGGTAACGTCCTTGGCTACGCCGCCGGTTCCTTTAGCGGCCTCCATAAAATGTTCCCGTTCACCATGACGAAAGCATGTAACATTTACTGCGCTAATCTCAAAAGCTGTTTCTTCCTCTCCATCATTCTCCTCCTCACACTATCAACGGCAGCGTTGATATACGTGAAGGAGAAAGCAGTTGTGATTGATCAGAAAAATAATAAGGAACCGGAAGAAGGTTCGATGAAATGTTTAGGGGAATTATTCAGTGCATTTCATGAACTAAAACGTCCTATGTGGATTCTGTTATTGGTGACGTGTCTAAATTGGATAGCATGGTTTCCATTCTTGTTATTCGACACTGATTGGATGGGGAAAGAAGTGTATGGAGGAACAATTGGAGATGGAAAAGCTTCAAAGGCGTACGATATGGGAGTGCGCGCGGGTGCACTGGGACTCATGTTAAACTCTGTTGTTCTTGGTGTGACGTCACTTGGGGTTGAGTTTTTAGCGCGTGTGGTTGGGGGCGTGAAGAGATTGTGGGGCATAGTTAATTTCTTGCTAGCAATTTGTTTGGCTATGACGGTGTTGGTTACTAAGATGGCTGAGCATTCACGGCAGTTCCCCGGCGGCGACACCAACGCTGATCCTCTCCATCCTACACTAACCATCAAGGCTTTGGCTTTGACTCTTTTCTCTGTCCTCGGTATCCCTCTTGCGATTACTTACAGCATACCCTTTGCTCTGGCATCTATTTTCTCCATCACCTCTGGGGCTGGCCAAGGGTTATCTCTTGGAGTTCTTAATCTTGCTATTGTCATACCACAGATGATCGTGTCAGTGCTTAGTGGACCATGGGATGATGCATTTGGTGGTGGTAACTTACCAGCATTCGTGGTGGGTGCTGTGGCAGCTGCAGCCAGTGGGATACTATCCATAGTCCTGCTGCCATCTCCACCACCAGAATTGGCCAATTCTGCAACTGCTACTGGAGGAGGGTTCCATTAA 1557 0.4888 MESLSSKNNSKIGKPSLEVEAMAPIEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSFIWLCGPISGMLVQPVVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHATGDNLQKKSRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDHRKTRNANAFFSFFMAVGNVLGYAAGSFSGLHKMFPFTMTKACNIYCANLKSCFFLSIILLLTLSTAALIYVKEKAVVIDQKNNKEPEEGSMKCLGELFSAFHELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTIGDGKASKAYDMGVRAGALGLMLNSVVLGVTSLGVEFLARVVGGVKRLWGIVNFLLAICLAMTVLVTKMAEHSRQFPGGDTNADPLHPTLTIKALALTLFSVLGIPLAITYSIPFALASIFSITSGAGQGLSLGVLNLAIVIPQMIVSVLSGPWDDAFGGGNLPAFVVGAVAAAASGILSIVLLPSPPPELANSATATGGGFH 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0092 518 Gene3D MFS general substrate transporter like domains 25 498 IPR036259 -
Lal24g0092 518 Pfam MFS/sugar transport protein 41 295 - -
Lal24g0092 518 PANTHER SUGAR TRANSPORTER 16 509 - -
Lal24g0092 518 CDD MFS_SLC45_SUC 33 478 - -
Lal24g0092 518 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 503 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lal24g0092 518 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 16 509 - -
Lal24g0092 518 SUPERFAMILY MFS general substrate transporter 31 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0092 Lal-Chr24 613319 616054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0092 1 518 Sucrose Transporter Gene Family AT1G71890 67.500 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0092 K15378 - gmx:547679 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0119 12 820796 824217 Lal24g0092 24 613319 616054 LSH
Lal9g0908 9 6844079 6846140 Lal24g0092 24 613319 616054 PCT
Lal24g0092 24 613319 616054 Lal2g1029 2 7051030 7053818 PCT