Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0078 ATGACGATGGCGTCATCCAAGGCGATGATGATGTCGTCTTCCAATTCCAGAAAATCTAGATCACCTTCTCCCAATCCCCAATTCCCCACCACCAATTTCATTCCCATTTCCGATTCTACCTTCTTCGATCCCTCTCCTCCTCCATCCTCCAGAACCGTCGACGACGTCTGGCGGGAGATCGTCGCCGGCGACGGTAAACCGGAGTGCAAGGAGGAAACTCCCGACGATGATTTGATGACCCTAGAAGACTTCCTCATGAAGGCAGGTGCTGTGGGAGAAGACGAGGTTGGGGTTGATGATGATGATGATGGTGAAGTGAAGATGACAATTCCCTTAACTCAGAGTTTGAGCAGTGGTGCAAGCATGTTTGCATATGATCCAGTGTATCAGGGTGGTGGAATGGAGAGTTTGGAAGTGATTGGGTTTGGGAATGGAGTGGAAGGTGGTGGTGGAAGTGGAAGTGGAAGTGGAGGGAGGGGGAAGAGGGGACGTTCTGTTTCCGAGCAGTTGGATAAGGCGGCGCAACAGAGACAGAAGAGAATGATTAAGAATAGAGAATCTGCTGCTAGGTCAAGGGAACGCAAGCAGGCTTACCAAGTTGAATTGGAGTCACTGGCGGTTAAACTAGAGGAGGAAAATGACAAGCTCATGAAGGAGAAGGCTGAGAAGAGAAAAGAAAGGTACAAGCAGCTGATGGAAAAATTAATCCCTATTGTGGAGAAGCGAAGGCCACCGCGTGTACTGCGCAGGGTTCACTCCTTGCAGTGGTAG 771 0.5006 MTMASSKAMMMSSSNSRKSRSPSPNPQFPTTNFIPISDSTFFDPSPPPSSRTVDDVWREIVAGDGKPECKEETPDDDLMTLEDFLMKAGAVGEDEVGVDDDDDGEVKMTIPLTQSLSSGASMFAYDPVYQGGGMESLEVIGFGNGVEGGGGSGSGSGGRGKRGRSVSEQLDKAAQQRQKRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLMKEKAEKRKERYKQLMEKLIPIVEKRRPPRVLRRVHSLQW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0078 256 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 40 255 IPR043452 GO:0003700|GO:0045893
Lal24g0078 256 MobiDBLite consensus disorder prediction 1 47 - -
Lal24g0078 256 MobiDBLite consensus disorder prediction 148 196 - -
Lal24g0078 256 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 226 IPR004827 GO:0003700|GO:0006355
Lal24g0078 256 CDD bZIP_plant_BZIP46 176 222 - -
Lal24g0078 256 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 40 255 - -
Lal24g0078 256 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Lal24g0078 256 Pfam bZIP transcription factor 174 232 IPR004827 GO:0003700|GO:0006355
Lal24g0078 256 Gene3D - 174 230 - -
Lal24g0078 256 MobiDBLite consensus disorder prediction 164 196 - -
Lal24g0078 256 SUPERFAMILY Leucine zipper domain 176 227 IPR046347 GO:0003700|GO:0006355
Lal24g0078 256 MobiDBLite consensus disorder prediction 1 54 - -
Lal24g0078 256 SMART brlzneu 172 236 IPR004827 GO:0003700|GO:0006355
Lal24g0078 256 Coils Coil 195 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0078 Lal-Chr24 500161 507342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0078 51 256 bZIP Transcription Factor Family AT5G44080 54.545 9.29e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal24g0078 bZIP_1 4.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0078 K14432 - gmx:102659969 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0078 24 500161 507342 Lal24g0078 24 500161 507342 ECH
Lal12g0092 12 623674 626255 Lal24g0078 24 500161 507342 LSH