Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0073 ATGCAGCTGGGAGACCCAACTGTGTTGGAGACCTACTCCGGCGAGGCCGTGGCGGAGAATGAGGGTGTCAACGGAGTCAGCGAAGAGAAGGGAATAATAATAATAACTAATGATAGTGTTGATGGTCATGGAGATGAGAGCTATGAGAAGATGAACGGTGGAGGAAACCGGTGGCCCCGCCAAGAAACAATTGCTTTATTGAAGATAAGGTCGGATATGGATGCTGTATTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGATGTTTCAAGTTTGGTGTCTCAACAGCTTCTTCATCTTTGTTTATGCCGTTTTCTTTATGGTTTTGAACAAACTATGCTCGAAACCAGAAAGCTTAAGATCATGAAACTAGCAGATCTTGGTTATCACAGAAGCGCAAAGAAATGCAAGGAGAAATTTGAGAACGTGTTCAAGTACCACAAGAGAACAAAAGAGAGCAGAAGTGGGAAATCTGAAGGAAAAACATACAGATTCTTTGATCAATTACAAGCCCTTGAGAAACAATTAAGTGTCTCTTCTTACCCGCCAAAACCACAACCACAACCTACTTTGTCAACAACAAACAACAACATTTCCAGTGATACTGTTGCATCTATCCCTTTGATTTCCACCACCACTTTTCCATCCACAAACCCTACAATCATTTCTCCTCCTCCACTACCACCATCACAAACCAATATCACTTGCACAACAAAAACTGTGGTAACCAACCCTAACAATGATAATAACAACAACACTGTTTCATATTCTTTGCCCAATATCACAAACCTTTTCATCAACGCATCTTCAACATCTTCTACGGCTTCGGATGAAGACTTGGAAGAGAAGTACAGAAAGAAGAGGAAACGGAAGGATTACTTCCTGAGGCTGACGAGACAGGTCTTGGCCAAGCAAGAGGAGATGCAGAAGAAGTTCTTGGAAATGATAGACACAAGGGAGAAGGAATACGTGACAAAACAAGACGCTTGGAGGATGGAACAAATGGCAAGGATCACTAGAGAACGTGAACTTCTTGCCCAAGAAAGAACAACCGCAGCAGCAAAAGATGCTGCAATTGTTAAATTCTTGCAAAAGTTATCTGGTGGGCATAATCTGACGACACAACTTGTTGACCAGACAACTTCTGCAAAAATAACACAAACATCATCGCTGTCATTATCACCTCTACCGTCACTTCCACCGGTATCACAAGTATTACAACCACAGCCACAGCCACAGCCACAACAAAAACATATGAATCAACTGCCATTGATGGTGATTAACAACAACGTTGAAATCCAGAAAATGAATCACGGTAACAGTAGTGGTGGACGTCCATTAAACTCTTCTTCAAGGTGGCCAAAGGCAGAAGTTCAAGCTCTGATAAGGCTTAGGACGAGTCTTGATGCTAAGTATCAAGAGAATGCACCAAAAGCTCCACTGTGGGAGGATATCTCAGCTTGGATGCAAAGGCTTGGGTACACTAGGAATGCTAAGAGATGCAAGGAGAAATGGGAAAACATCAATAAGTACTTCAAAAAGGTGAAGGAAAGTAACAAGAAAAGGCGGGAGGATAGTAAGACATGCCCCTATTTTGAAGAGCTTGAAGCTCTATACCAAGAAAAGAGCAAAAATCAGAACCCCTTTGGTGTTGTTGCTTCTGGATTCAACAATATGAAGCCAAATGAGATGATGGAACCATTGATGGTGCAACCAGAACAGCAATGGAGGCCACCCACTGAGAATGAGTTGACTGAGAATAATGGAGATAAAAAAAGAGTGAGGGAAGATGCAGAAAAAGGAGATAGCATGGAAGATGATAAGGATGATGGTGAAGAAGATGGAGATAGCATGGAAAAAGACGAAGAAGGAGATAACGGTTATGAGATTACTACAAATAAACTTCCTTCAGTGGACACAGTTGAATGA 1932 0.4193 MQLGDPTVLETYSGEAVAENEGVNGVSEEKGIIIITNDSVDGHGDESYEKMNGGGNRWPRQETIALLKIRSDMDAVFRDSSLKGPLWEDVSSLVSQQLLHLCLCRFLYGFEQTMLETRKLKIMKLADLGYHRSAKKCKEKFENVFKYHKRTKESRSGKSEGKTYRFFDQLQALEKQLSVSSYPPKPQPQPTLSTTNNNISSDTVASIPLISTTTFPSTNPTIISPPPLPPSQTNITCTTKTVVTNPNNDNNNNTVSYSLPNITNLFINASSTSSTASDEDLEEKYRKKRKRKDYFLRLTRQVLAKQEEMQKKFLEMIDTREKEYVTKQDAWRMEQMARITRERELLAQERTTAAAKDAAIVKFLQKLSGGHNLTTQLVDQTTSAKITQTSSLSLSPLPSLPPVSQVLQPQPQPQPQQKHMNQLPLMVINNNVEIQKMNHGNSSGGRPLNSSSRWPKAEVQALIRLRTSLDAKYQENAPKAPLWEDISAWMQRLGYTRNAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFEELEALYQEKSKNQNPFGVVASGFNNMKPNEMMEPLMVQPEQQWRPPTENELTENNGDKKRVREDAEKGDSMEDDKDDGEEDGDSMEKDEEGDNGYEITTNKLPSVDTVE 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0073 643 MobiDBLite consensus disorder prediction 179 199 - -
Lal24g0073 643 CDD GT1 56 152 - -
Lal24g0073 643 CDD GT1 452 517 - -
Lal24g0073 643 Pfam Myb/SANT-like DNA-binding domain 452 539 IPR044822 -
Lal24g0073 643 Pfam Myb/SANT-like DNA-binding domain 124 173 IPR044822 -
Lal24g0073 643 MobiDBLite consensus disorder prediction 573 643 - -
Lal24g0073 643 MobiDBLite consensus disorder prediction 604 624 - -
Lal24g0073 643 PANTHER - 35 632 - -
Lal24g0073 643 ProSiteProfiles Myb-like domain profile. 446 510 IPR001005 -
Lal24g0073 643 MobiDBLite consensus disorder prediction 585 603 - -
Lal24g0073 643 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 35 632 - -
Lal24g0073 643 Gene3D - 58 150 - -
Lal24g0073 643 Gene3D - 454 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0073 Lal-Chr24 456264 459306 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0073 49 576 Trihelix Transcription Factor Family AT1G76890 43.423 9.04e-127 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal24g0073 Myb_DNA-bind_4 2.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0073 - - gsj:114370603 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0073 24 456264 459306 Lal24g0073 24 456264 459306 ECH
Lal12g0087 12 592010 595471 Lal24g0073 24 456264 459306 LSH
Lal2g0982 2 6660245 6663784 Lal24g0073 24 456264 459306 PCT
Lal9g0869 9 6497164 6501127 Lal24g0073 24 456264 459306 PCT
Lal24g0073 24 456264 459306 Lal2g0982 2 6660245 6663784 PCT
Lal24g0073 24 456264 459306 Lal9g0869 9 6497164 6501127 PCT