Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0072 ATGAGGGACGGAGAGGTGGCGGCGGCGGTGGTAGGTGGTGGTGGATCAACTTCAGGAGATGAAGAGAGAAGAATGGAAGAAGGTGAGCGAAGTGGTTTAGGTGGAAACCGGTGGCCAAGACAAGAGACTTTGGCTTTGTTAAGGATACGGTCGGATATGGACGTGGCGTTTCGTGATGCAAGTGTTAAAGCTCCCTTGTGGGACCAAGTCTCGAGGAAGCTAGCTGAGCTGGGGTATCAAAGAAGTGCGAAGAAGTGCAAAGAGAAATTTGAGAACGTGTACAAGTATCACAAAAGAACCAAAGATAGTCGAAGTGGCAAATCAGAAAGCAAAACTTATAGATTTTTTGATCAATTACAAGCTCTTGAACATCACAACCCTCCAACAGCTCAATCCCCTAACACACAAAAACCACCACAATCATCACTAGCACCACCACCAATATCATCATCAATTGTAGCAACTACAACAATGACGCCCGCAAGAACAAAAACAGTGCCAATGCCACCAGTGGCTAACACCACTCTCAGTATTCCATCAACAACAATGCTACCTATGGCAATTCCTCAAGGCATTGTCACTTCTACCCCATCTATTAACCTCATAAATATCCCTTCCTATCAAACTACAAACCCTACAAACTTCACACCACCGCCATCAACAAACCCTACCACAAGTGCCACAATTCCGATATCTTTCCCGAACGTCCCAAATAATGTCGTGTCCAACTCAAGTATCTCTTCCTCATCGACTTCTTCCGATGAAATGTTGGAGGGGAGGCGCAAACGGAAGCGCAAATGGGAAGACTTCTTCAACAGACTAATGAAGAAGGTAATGGAGAAGCAAGTGGAACAACAAAGGATATTCTTGGAAGCTATAGAGAAACGCGAGCACGAGCGAATGGTGAGAGAAGAAGCATGGAGAGTGCAAGAGATTCAAAAGATCAATAGGGAGAGGGAAATTATAGCTCAAGAAAGATCCACAGCCGCTGCCAAGGATGCTGCAGTCATGGCTTTCTTGCAAAAGATAGCTGAAAGACAAAATTTTGGACAAGCATTGAATAACTTTACTATTCCGCCACTACCACAGCAACAGCAATCTCAATTACAACCACAACTGGTGGCACAACCAATTGCACCACCAGCACCAACTATTGTTCCAACACTTGTGCAACAACAAATACAACTTACTGTTCAGCCTGGCCCAGCACTGCAACCCGTGGTCCCACCACTACAACAACAAGTCACAAATACAGAAATCGTGAGAGCTGATAATAATGGGGAGAATATGATAGGAGTGAGCTCATCAAGGTGGCCAAAAGTGGAGATAGAAGCCTTGATAAAGCTGAGAACTGAGCTTGACGCGAAGTACCAAGAGAACACACCAAAAGGACCACTTTGGGAAGAGATCTCATCCTCAATGAGGAAGCTTGGGTACAATAGGAATCCAAAGAGGTGCAAAGAGAAATGGGAAAACATCAACAAGTACTTCAAGAAGGTGAAGGAAAGTAACAAGAAGAGAACACAAGATTCAAAAACATGTCCATATTTTCAGCAGCTGGATGCATTATATAAAGAGAAGAACAAGATGGTGCAGCAGGAGAGTATGGTGACGGCGCTGATGGTGCAGCCAGAACAACAATGGCCTCCTCAACAGCAGAGAGAAGAAGATAATGATGAAGATGATGATTTTGATGATGAATATAAAGAAAGTGAAGGTGGCAAGTATGAAGTAGTGGCAAACAAGGCTGCATCAGGTGAGTAG 1764 0.4433 MRDGEVAAAVVGGGGSTSGDEERRMEEGERSGLGGNRWPRQETLALLRIRSDMDVAFRDASVKAPLWDQVSRKLAELGYQRSAKKCKEKFENVYKYHKRTKDSRSGKSESKTYRFFDQLQALEHHNPPTAQSPNTQKPPQSSLAPPPISSSIVATTTMTPARTKTVPMPPVANTTLSIPSTTMLPMAIPQGIVTSTPSINLINIPSYQTTNPTNFTPPPSTNPTTSATIPISFPNVPNNVVSNSSISSSSTSSDEMLEGRRKRKRKWEDFFNRLMKKVMEKQVEQQRIFLEAIEKREHERMVREEAWRVQEIQKINREREIIAQERSTAAAKDAAVMAFLQKIAERQNFGQALNNFTIPPLPQQQQSQLQPQLVAQPIAPPAPTIVPTLVQQQIQLTVQPGPALQPVVPPLQQQVTNTEIVRADNNGENMIGVSSSRWPKVEIEALIKLRTELDAKYQENTPKGPLWEEISSSMRKLGYNRNPKRCKEKWENINKYFKKVKESNKKRTQDSKTCPYFQQLDALYKEKNKMVQQESMVTALMVQPEQQWPPQQQREEDNDEDDDFDDEYKESEGGKYEVVANKAASGE 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0072 587 CDD GT1 36 101 - -
Lal24g0072 587 MobiDBLite consensus disorder prediction 1 37 - -
Lal24g0072 587 MobiDBLite consensus disorder prediction 543 587 - -
Lal24g0072 587 Gene3D - 438 499 - -
Lal24g0072 587 Gene3D - 38 99 - -
Lal24g0072 587 CDD GT1 436 501 - -
Lal24g0072 587 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 15 576 - -
Lal24g0072 587 MobiDBLite consensus disorder prediction 125 150 - -
Lal24g0072 587 PANTHER - 15 576 - -
Lal24g0072 587 MobiDBLite consensus disorder prediction 19 33 - -
Lal24g0072 587 SMART sant 434 496 IPR001005 -
Lal24g0072 587 SMART sant 34 96 IPR001005 -
Lal24g0072 587 Pfam Myb/SANT-like DNA-binding domain 36 122 IPR044822 -
Lal24g0072 587 Pfam Myb/SANT-like DNA-binding domain 436 523 IPR044822 -
Lal24g0072 587 ProSiteProfiles Myb-like domain profile. 30 94 IPR001005 -
Lal24g0072 587 ProSiteProfiles Myb-like domain profile. 430 494 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0072 Lal-Chr24 444317 453439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0072 28 561 Trihelix Transcription Factor Family AT1G76890 44.853 4.47e-138 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal24g0072 Myb_DNA-bind_4 1.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0072 - - lang:109353888 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0867 9 6437225 6441053 Lal24g0072 24 444317 453439 PCT
Lal24g0072 24 444317 453439 Lal9g0867 9 6437225 6441053 PCT