Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0071 ATGGAAGGAAATTTGTCACAGGGAGGTATAATTCAAGGTGGGACTTCTTTTGGTGGCTTTGGTTTGCAAGAATCTATTCAGGTTCATCATCAAGCACAGCATCCCCGTACCATGCACCAGCGTCAAACTCTTCCGCGTCAAGGGTCTTCTGTACATTCTTCAGTTCATGAAGGTTTTCCTCTTACAATGGGAACCTTACAGAACTGTGATCACACCATTCCAATGACAGACTTTAGCAAGGTAGATAGAAGTAAAAACTCAGCAAGTGAAGAAGACGAGCCGAGCTTTACCGAGGATGGTTTTGATGGTCAGCATGAACCCGGCAGAGGGAAAAGGGGGTCACCTTGGCAACGTGTGAAGTGGAGTGATAAGATGGTGAAGCTTCTGATAACAGCTGTTTCTTATATAGGTGAGGATGGGACTTCTGATGGCAGCGGCAGCAGAAGAAGAAAATTTGTGATTCTACAGAAAAAAGGCAAGTGGAAATCTATTTCGAAAGTCATGGCTGAAAGGGGTTATCAGGTTTCACCTCAACAGTGTGAGGATAAGTTCAATGATCTCAATAAGAGGTATAAAAGGCTTAATGATATGCTCGGGAGGGGAACTTCTTGTCAGGTTGTTGAAAATCCTGCGCTGTTGGATTTAATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGCAAAATATTAAGCTCAAAACACCTGTTCTATGAACAGATGTGTTCCTATCATAATAGTAATAGATTGCATTTGCCCCATGATCCTGCATTGCAACGTTCACTACAGTTAGCTCTCCGAAATAGAGATGATCATGATAATGATGATATCGGTAGGTCCCGCCATGATGATCATGATGAAGATGATCAAGATGATGAAGTCGATGGTCATGGTGAGTTTGAAGAGAATTATGCTTCTCATGGAGGCAGTAGAGGAATATATGGGCCATTAGGGGGGTCTATGGAGAAGAAATTGAAACAGTGCCATGAAGATGCTTCTACTTTTGTTAATCCTTTAAGCTGTCAGGACCATAACAAACATGCATATCCCCATAGACAGATGGTCCAATCTGATGCTAATCAAGTTCTACCTGAAGGCACGAGAGAAGCTTGGTTACAGAAGCAATGGTTTGAATCTCACTCACTCCAGTTAGAAGAACAGAAGCTACAAATTCAGGTTGAGATGTTGGAACTAGAGAAGCAGAGATTCAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCGGGAGCTGGAGAAACTGAGAATGGAAAATGAAAGGATGAGGCTTGAAAATGAACACATTGCTTTAGAACTGAAGCAGAAGGAAATAGGGTCCAGTGAATCTGAGGGAAGGATGATTACTTGTTTGGTCATCGATGAAACTATAACTATCCTTTGCAGTTTGGGTTTAAAAATGTTGGAAACTGGTGTCCTGGGCTATAGATGTTATGAACTAATATCTGTTGGATCTTATGAAAGAATGGATGTCAAAATCGAGCATATATTATTGGCTTGTCCATTGAAATCGCAATCATCTCTACGGAGGAGCAATGCCTTTGGCTTAAAGTTCTGTTTAGTGTCTTATGCTGAAGAAGAAAGAAAGCCTCAATGGATGATGCAGCAGAATAGATGA 1629 0.4131 MEGNLSQGGIIQGGTSFGGFGLQESIQVHHQAQHPRTMHQRQTLPRQGSSVHSSVHEGFPLTMGTLQNCDHTIPMTDFSKVDRSKNSASEEDEPSFTEDGFDGQHEPGRGKRGSPWQRVKWSDKMVKLLITAVSYIGEDGTSDGSGSRRRKFVILQKKGKWKSISKVMAERGYQVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDLIDYLSEKEKDDVRKILSSKHLFYEQMCSYHNSNRLHLPHDPALQRSLQLALRNRDDHDNDDIGRSRHDDHDEDDQDDEVDGHGEFEENYASHGGSRGIYGPLGGSMEKKLKQCHEDASTFVNPLSCQDHNKHAYPHRQMVQSDANQVLPEGTREAWLQKQWFESHSLQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLRMENERMRLENEHIALELKQKEIGSSESEGRMITCLVIDETITILCSLGLKMLETGVLGYRCYELISVGSYERMDVKIEHILLACPLKSQSSLRRSNAFGLKFCLVSYAEEERKPQWMMQQNR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0071 542 MobiDBLite consensus disorder prediction 77 117 - -
Lal24g0071 542 MobiDBLite consensus disorder prediction 83 117 - -
Lal24g0071 542 Coils Coil 409 438 - -
Lal24g0071 542 MobiDBLite consensus disorder prediction 269 318 - -
Lal24g0071 542 MobiDBLite consensus disorder prediction 269 286 - -
Lal24g0071 542 MobiDBLite consensus disorder prediction 28 56 - -
Lal24g0071 542 Coils Coil 379 401 - -
Lal24g0071 542 Pfam Myb/SANT-like DNA-binding domain 118 243 IPR044822 -
Lal24g0071 542 MobiDBLite consensus disorder prediction 28 57 - -
Lal24g0071 542 Gene3D - 121 193 - -
Lal24g0071 542 PANTHER F16F4.11 PROTEIN-RELATED 1 444 - -
Lal24g0071 542 PANTHER FACTOR, PUTATIVE-RELATED 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0071 Lal-Chr24 438591 441682 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal24g0071 Myb_DNA-bind_4 3.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0071 - - gmx:100816474 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0071 24 438591 441682 Lal24g0071 24 438591 441682 ECH
Lal12g0086 12 588091 589036 Lal24g0071 24 438591 441682 LSH
Lal2g0981 2 6629912 6635667 Lal24g0071 24 438591 441682 PCT
Lal9g0861 9 6384814 6388393 Lal24g0071 24 438591 441682 PCT
Lal24g0071 24 438591 441682 Lal2g0981 2 6629912 6635667 PCT
Lal24g0071 24 438591 441682 Lal9g0861 9 6384814 6388393 PCT